Gene Psyr_2705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2705 
Symbol 
ID3368222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3286524 
End bp3287135 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content58% 
IMG OID637653053 
Producthelix-hairpin-helix DNA-binding motif-containing protein 
Protein accessionYP_235782 
Protein GI66045941 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.847169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.058179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATC CATTGCGCCG GGGCGCTGCC TCATTCACCG GATATCTTTC ACATAAGGCC 
ACTATGGATA CGGGAGCACG ACTCAAACTG GTGCGTGAAA GCTACAAGCT GTCACAGCGT
GAGCTCGCCC GACGCAGTGG TGTGACCAAT GCCACGATTT CCCTTATCGA ACAAAATCGT
GTCAGTCCTT CCATCAGCTC GCTGAAAAAG CTGCTTGAGG GGATTCCCAT GACGCTGGCG
GATTTTTTCA CATTCGATCA GCCTCCGGGA CAGGATCAGT ACGTGTTTCG AGCCGGTGAT
CAACCCGATC TGGGGCGCAA CGGTGCCCGT TTGCTGCTGG TGGGCGCGAC CCTGCCAAGC
CGGCAGATGC GTTTTCTGCG TGAGCAATAC GCGCCGGGTG CCGACTCGGG CGATGAGCCG
ATCGTTCACA GCGAAGGCGA GGAGTGCGGT CTGGTGACGC GCGGCACCGT GGAGCTGACC
ATCGATGGGC AAGTCAACAT TCTCGGTCCG GGGGACGGCT ATTATTTCCC GACCACCTTG
CCGCATCGCT TCCGCAATAT CGGCCATGAC GAAGCCGAGA TCATCAGCGC CAACACACCG
GCCAACTTCT AG
 
Protein sequence
MDDPLRRGAA SFTGYLSHKA TMDTGARLKL VRESYKLSQR ELARRSGVTN ATISLIEQNR 
VSPSISSLKK LLEGIPMTLA DFFTFDQPPG QDQYVFRAGD QPDLGRNGAR LLLVGATLPS
RQMRFLREQY APGADSGDEP IVHSEGEECG LVTRGTVELT IDGQVNILGP GDGYYFPTTL
PHRFRNIGHD EAEIISANTP ANF