Gene Psyr_2701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2701 
Symbol 
ID3368218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3281504 
End bp3282646 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content58% 
IMG OID637653049 
Producthypothetical protein 
Protein accessionYP_235778 
Protein GI66045937 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0359673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGTC TGTTCGACAG TTTTTTCATC GGCGGATTCG AGTGCGCCAG CCATCGACGA 
GGTGACGGTG TGCGACTCGA CCTGCTTCAC ACCACCGGGC ACGACCGCTG GACGCAGGAA
GATTTTGCCG CAGTGGCCGA GTGCGGAATG CGTACTGTAC GTGACGGTCT GCGCTGGCAT
CTGATTGAAG CCCGCCCAGG TTGTTACGAC TGGAGCAGTT TTCTGCCCAT GTTGCGAGCC
GCGCGGCATC AGGGCACCCA AGTCATCTGG GACTTGTGCC ATTACGGTTA CCCTGATCAT
CTGGATGTCT GGCGGCCGCA GTTTGTCGAG CACTTTGCGC GTTTTGCCGC TGCGGTGGCT
CAGCGCGTCA AGGACGAAGG GGAGACCGCA CCTTTCTATT CGCCGATCAA TGAGATTTCG
TTCTGGAGTT GGGCCGGGGG CGACATGGCT TATTTCAACC CCGGTAGTGA GCAGCGCGGC
ATGGAACTCA AGCATCAACT GGTCCGGGCC AGTATTGCGG CAATAGACGC GATACGCATG
ATAGAGCCCA ACGCGCGTTT TATTCAGGCC GAGCCATTGA TTCATGTAGT ACCGGCGACA
CGTGGCAGCG GAGATGCTGC GGCAGCAGAG CGCTATCGGC TGGCGCAGTT CGAAGCCTGG
GATCTTTTAT CCGGACGGCA ATGGCCTGGG CTGGGCGGCC GCCCCGAGTA TCTGGATATC
CTGGGCGTCA ACTTTTATCC GCATAATCAA TGGCAGCTCA ATGGCCATAA ACTTACGCAC
GACGATCCGC AGTACAGGCC TTTTCAGGGC ATGTTGAGCG AGTTGCACGG GCGATACGGC
AGACCGATAT TGATTTCTGA AACCGGTGCG GAAGACGTTC AGCGTCTGCC CTGGTTCAAT
TACGTTTGTG CCGAGGTCGG CAAGGCGTTG AGGGCCGGCG TACCTGTGCA AGGTATCTGC
TGGTATCCCG TTCTCGATTA TCCGGGCTGG GATGACGGCC GATACTGTCC GGCGGGGCTG
CTGGGTTATG CAGACGGGCA GGGTACGCGG GCGATCTTTG GCCCTTTGCA GGTGGCGTTG
CGCGACAACA CGCTTGAATT GGCGGCTCTC ATTCGAGAAA AGAATGGAAA ACCGGCCGTT
TGA
 
Protein sequence
MGGLFDSFFI GGFECASHRR GDGVRLDLLH TTGHDRWTQE DFAAVAECGM RTVRDGLRWH 
LIEARPGCYD WSSFLPMLRA ARHQGTQVIW DLCHYGYPDH LDVWRPQFVE HFARFAAAVA
QRVKDEGETA PFYSPINEIS FWSWAGGDMA YFNPGSEQRG MELKHQLVRA SIAAIDAIRM
IEPNARFIQA EPLIHVVPAT RGSGDAAAAE RYRLAQFEAW DLLSGRQWPG LGGRPEYLDI
LGVNFYPHNQ WQLNGHKLTH DDPQYRPFQG MLSELHGRYG RPILISETGA EDVQRLPWFN
YVCAEVGKAL RAGVPVQGIC WYPVLDYPGW DDGRYCPAGL LGYADGQGTR AIFGPLQVAL
RDNTLELAAL IREKNGKPAV