Gene Psyr_2698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2698 
Symbol 
ID3368215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3275756 
End bp3278167 
Gene Length2412 bp 
Protein Length803 aa 
Translation table11 
GC content51% 
IMG OID637653046 
ProductRicin B lectin 
Protein accessionYP_235775 
Protein GI66045934 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0894708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0551726 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA TGCCGGCTTT CACGTACGTG TTTTTCCTGG GTTTTTTCCA TTCAAACGCC 
TTTTCTACGG AGATGAATCC TTATGAGCAG ATCATCAGCA TTGCGCAAGG TGAGCAGGTC
TGTTTAACCC TCGACAGTGA TTTAAGTTCT GTCTCACTGC AGAAGTGTGT CAACACCGAT
TATCAACAAT GGATCTTTGT GTCATCAGGG TCCATGCTGT ACCTAAAAAA CAAGGCGTTA
GGCGGATCAA CGCAGGCCAT GTGTTTGTCA GCGTCGAATC CACGTCACGT CAGCATGAAA
ACCTGTGCCA GCGCCGACAG CAACGACTAT CAATCCTTGC GACTCTGGAG CAGAGACGGT
GACCACACCA GCGTGTTATC AAATAAATAC ATCAAGGATT TAGGCTTTGA TAACTACCTG
CTCAGTGATG GAAGCGGGCA GTTGGTATTT GGCCCTGCAG AGGGAGCTTC ATCACACTGG
ACAATCACCC AACCTCTTTA CGAAGAAATC ATCAGTACAG TGAATGGCCC GGACGCCTGT
TTAACACTGA CGGGTGACAT GACCAGTGTG GTACTGCAAA AGTGCCTGGG GAGGGACAGT
CAGCAATGGA CTTTTACGCC CAAGGAAAAA AGGCTTTATG TAAAAAACAA ACTGCTGTCC
ACATCAGCGC AAGAAATGTG TTTGTTTGCG GCGAATGCCA ACAGCGTAAA AATGGCCGCG
TGTGCCAGCG CGGGCAGTCA TGATTATCAG TCCAAGCGAC TGTGGAATCG GGACGGCAAC
AACCCCAGTC AGCTGTCAAA CAAATATATC AGTGATCTGG GAATGGCTAA CTACCTACAA
ATCAATGCCA GCGAACAGTT GATATTGGGT GGCAAAGAAC AAGGCTCGGC GAACTGGAGT
ATCGCCAAGC GTTATGGTTA CATCAGGAAC GTTGAAAAAG GGCAGGAAAC GTGCCTCGCG
TTGTCTGCAG ATGAAGTCAG CGTCGAGTTT TCTCCCTGTA AAAGTGTGCC CGGCCAAGAC
TGGCGAATGT CCGTCATCGT ACCGGGGTAT GACAAATTGA CCAATCGCGC GCTGCTGGAC
AGGGATACAG AAAAGTGCTT AGGGTCCACT AGTAAAATGA TCAACTGCCA AGGTACCGGG
TATACCTCGG AGCGTTCCTG GAGTTACAAC AGGAACTTCA TTCCCCTCAT AGAAGGGTTT
GTACTGGCCA ATAAATATCG CAACGACCTT GTCGGTGATA ACGAAGTTCT GGGCTTTGCA
GGTAACACCA TCCAGATGGT GCCGGAGTCA CGGTCGAAGG CAGTGACATG GAACTTTGAA
TTGGCAGTAC CCAAGATCCC CAGACGCCCC ATCGTAGGCG ATAGAAAAGT TCTCCTGCTG
CACACCCGAT ACAGTGACAA GCCAGAAACC GACTTCGAGG CCACCAGGGA GGCCTTCTTC
GGAGCGCCCG GTGATAACAC ATCATTTGTC AACGCGGTCT CTTTTTCCTC CGGCGATCAT
CTGAAGTTCA TCGGGGATGC GGTGACCGGT CTAGACCTGG GCCCCAGACC TTCAGGTTGC
CCCTCCACTG AACTGAGGAA CAAAGCGATA GAACTCGCAC GCGACAAGGG AACTGACAGG
GATAATTACG ATTATGTCGC CGTTGAGATT CCTTCTACTT CGTGCTCCTG GGGTGGGCTT
GCTGCGATGC CGGGCTGGTG GGCCATGGGA AATAATTCGG GCCACAAGCC ATGGATGTGG
CAACACGAAT TCGGTCATAG CCTCGGCGGA CCTCATGCGA CCTCGCTGGA GCGCTGCCCT
TACAATAGTC GGGAAGTTGT GCAAATCGGC GCCAGTGGGT GCGCAGTCAC TAATAGCGCT
GACCCTTCGG ATACCCTGAA TGGTGGGGGG TCACGTCTTT ACCCCATTCC TTATTTGTAC
TACGCGGGCT GGCTCACTGA TGACCAATTT CCTGAAGTGA TGAAAAATGG CACCTATAAC
ATTGCACCCT TGTTCAGAGC GGCGGATCCC GAAGTGGTCA AAGGCTTACG CCTGTTTCGT
AGCGATGGCA GTTATCTCAC GCTGGAATTC CGCAAGCCTT CACCCGGCTT TGAAAACTGG
CCAACTGACG ATCCATTTGT CAATGGTGTG ATTGTGAGAA TCGCTCGTTT TAATGGCAAC
TCCGTCTCCA ACACGCTCGT GGACACAACG CCATCAGGCA TACATGGCAT GAATGACGCT
CCGTTGCGGC AAGGTGGGTC GGCAGACGAC GTTTTATCCG GGAAGCGAAT CAGAGTGACC
CATGCCGATG ACACGGGGGC TACCGTTGAA ATCAACGATA TTCCTGGTAG CTCTTTGGCA
GAACGCTTGC TCTTTGAACG CTCTTTTAAT AAGCAGATTG CAGAACAGGA TGATGAGGTG
GTGGAAGATT GA
 
Protein sequence
MKTMPAFTYV FFLGFFHSNA FSTEMNPYEQ IISIAQGEQV CLTLDSDLSS VSLQKCVNTD 
YQQWIFVSSG SMLYLKNKAL GGSTQAMCLS ASNPRHVSMK TCASADSNDY QSLRLWSRDG
DHTSVLSNKY IKDLGFDNYL LSDGSGQLVF GPAEGASSHW TITQPLYEEI ISTVNGPDAC
LTLTGDMTSV VLQKCLGRDS QQWTFTPKEK RLYVKNKLLS TSAQEMCLFA ANANSVKMAA
CASAGSHDYQ SKRLWNRDGN NPSQLSNKYI SDLGMANYLQ INASEQLILG GKEQGSANWS
IAKRYGYIRN VEKGQETCLA LSADEVSVEF SPCKSVPGQD WRMSVIVPGY DKLTNRALLD
RDTEKCLGST SKMINCQGTG YTSERSWSYN RNFIPLIEGF VLANKYRNDL VGDNEVLGFA
GNTIQMVPES RSKAVTWNFE LAVPKIPRRP IVGDRKVLLL HTRYSDKPET DFEATREAFF
GAPGDNTSFV NAVSFSSGDH LKFIGDAVTG LDLGPRPSGC PSTELRNKAI ELARDKGTDR
DNYDYVAVEI PSTSCSWGGL AAMPGWWAMG NNSGHKPWMW QHEFGHSLGG PHATSLERCP
YNSREVVQIG ASGCAVTNSA DPSDTLNGGG SRLYPIPYLY YAGWLTDDQF PEVMKNGTYN
IAPLFRAADP EVVKGLRLFR SDGSYLTLEF RKPSPGFENW PTDDPFVNGV IVRIARFNGN
SVSNTLVDTT PSGIHGMNDA PLRQGGSADD VLSGKRIRVT HADDTGATVE INDIPGSSLA
ERLLFERSFN KQIAEQDDEV VED