| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2697 |
|---|
| Symbol | |
|---|
| ID | 3368214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 3273861 |
|---|
| End bp | 3275342 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637653045 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_235774 |
|---|
| Protein GI | 66045933 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0933848 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.158147 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCTC GTGTGCTTTC ACCGTTGCTG TTGTTGCTGG GTGCAATGCT GTTTTTCCTC
GCGTTGGGCA ATCACCAATT ACAAAACTCG ACAGAACCCC GCGTGGCGGG AATTGCCATG
GAAATGCACC TGAGCGGCAA CTGGGTTACC CCGAAACTGA ACGATCAACC GTTCCTGGAA
AAGCCGCCGA TGAGCGTCTG GCTCGACGCT GCGTCCATCG GGGCGTTCGG TGCGACTCTC
TGGGCGGTCA GGCTCGCGTC CGCCTGTGCG GGGCTGTTCA GCGTGTTGCT GCTGTACAGC
ATGCTGCGTC GCTTCGGGCG ACCTGCCTCC GTGGCGTGGG TGGCTGCATT CATGCTCGCG
ACCCAGGCCA GTTTCTGGAG CAATTCGCGT CAGGTGGGCG AGGACGCGTT GCTGGCGCTG
GGTGTGAGCA TGGCGTTGCT GGGGTTCTTT CACGCCAGTC AGCGTTTGCG CAGCGACGGA
TTTCCCGCAG GGGCCTGGCT GCTCTTCGTA GTGGGGATCG CGCTGGCAAC CCTGAGCAAG
GGTGTGCTGG GCCTCGCGAT GCCGGGTGTG GTCATTTTCG CCTGGCTGGT GTGCGAGTCG
GTGCGGAGCA AACGCATTGT TCCCGTCCAC TGGCTACGCC CGGCGATGTT TACCGTCCTG
GCTTTGGTGC CTTTGCTGGT ATGGCTGTGC TTTCTATACG GGCAGGGCGG TACGCAGTCG
TTGAAGGACG TGCTCTGGAC CAACAGTGTC GGACGCTTTA GTGGTTCGTT CGAAGAGGCA
GGGCATTACG AGCCCGTGCA TTATTACCTG AGCAAACTGC CTGAAGCGTT TTTGCCGTGG
AATGTGCTCG TCTATCTGGG GCTGTGGCAT TTCCGTAAAC AGCTGCTGGC CAATCGTTAC
CTGCTGTTTT TCAGCCTGTG GCTGATCGCG CAGTTCCTGC TGTTGTCGCT GGCCTCGAGT
AAACGCATGG TTTATCTGAT GTCACTGGCC CCGGCGGCGG CAGTCATCGC GGCGGAATAT
GCCTTTGTGT TGGGCGAGCG CATCAAGGCA CGCTCGCAAG GCTCTGCATC TGCAGCGTTT
GTGCTACGAA ACCGACGGGC GATGACGGTT GCCGGGGCGG TGTTGATCGT GACGGCGTAT
CTCGGCGCAG CCATGTGGCT GGAACCGCGA GCGGACCGGC AGTTATCGTT CCTGCCGCTG
ACCGACAAGG TTCATGCTCT GCAGGTCCAG GGACGGCATG TTGTTTTGTT TCAGCCCAGC
GAACGGCTGG CAGGGGCCAG CGTGTTCTAC AGCCATAGCT TGCTGGACAC GTTCACGTCC
AGTGCTGAAT TGAGCACCTT TCTGACCCGT GCCGACGGCA ATGTGGCGCT AATGGAAAGC
CTGCAGCCTC CCGAACCACC CTTGCGAATG GTCGACAGCG TCAAGGTCGG CGAGCGTATC
TACTATTTCG TCACTCAGGC TCCAGCGACT GTCGGCAACT GA
|
|---|
| Protein sequence | MTSRVLSPLL LLLGAMLFFL ALGNHQLQNS TEPRVAGIAM EMHLSGNWVT PKLNDQPFLE
KPPMSVWLDA ASIGAFGATL WAVRLASACA GLFSVLLLYS MLRRFGRPAS VAWVAAFMLA
TQASFWSNSR QVGEDALLAL GVSMALLGFF HASQRLRSDG FPAGAWLLFV VGIALATLSK
GVLGLAMPGV VIFAWLVCES VRSKRIVPVH WLRPAMFTVL ALVPLLVWLC FLYGQGGTQS
LKDVLWTNSV GRFSGSFEEA GHYEPVHYYL SKLPEAFLPW NVLVYLGLWH FRKQLLANRY
LLFFSLWLIA QFLLLSLASS KRMVYLMSLA PAAAVIAAEY AFVLGERIKA RSQGSASAAF
VLRNRRAMTV AGAVLIVTAY LGAAMWLEPR ADRQLSFLPL TDKVHALQVQ GRHVVLFQPS
ERLAGASVFY SHSLLDTFTS SAELSTFLTR ADGNVALMES LQPPEPPLRM VDSVKVGERI
YYFVTQAPAT VGN
|
|---|
| |