Gene Psyr_2696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2696 
Symbol 
ID3368213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3272446 
End bp3273840 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content61% 
IMG OID637653044 
ProductUDP-glucose 6-dehydrogenase 
Protein accessionYP_235773 
Protein GI66045932 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0108367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.14753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA GCGTTTTCGG TAGCGGATAT GTCGGCCTGG TACAAGCGAC CGTGCTTGCC 
GAAGTCGGCC ACGATGTGGT CTGCATGGAC ATCGATCAGG CCAAAATCGA CCAGTTGCGT
CAGGGCCAGG TGCATATCTA CGAGCCTGGC CTGGCCAATC TGGTACGTGA AAACCTCGAC
CAGCAGCGCC TGTGCTTCAC CACCGACGAG CAGCTGGCAG TGGAACATGC CGAGGTCCTG
TTCATTGCGG TAGGCACGCC GTCCCGAGCC GATGGCTCCG CCGACCTGAG CGGCTTTTTC
GCGGTGGGCG AAGCCATCGC CCGGCATCGA CGCGAACCGC TGATCATCGT CGAGAAGTCC
ACCGTGCCGG TCGGCAGTGG CGACGCCTTG CGCAGCCACA TCGACAAGGC GCTGCGTCAG
GCGGGCCGGC TGTTGCAGTT CGATATCGTC TCCAATCCGG AGTTTCTCAA GGAGGGCTCG
GCGGTCAACG ATTGCCGGCG CCCGGACCGT ATTGTCATCG GCTGCGAAAA TGAAGCGGTG
CGCAACGTCA TGCGCGAGCT GTATGCACCG TTCAACCGCA ATCATGAGCG GATCATGTTC
ATGGACCTGC GCAGCGCCGA ACTGACCAAG TACGCCGCCA ACTGCATGCT GGCAACCAAG
ATCAGCTTCA TCAACCAGAT CGCCGAACTG GCCGAGCATC TGGGCGCGGA CGTCGAGTCG
GTGCGGTTGG GCATTGGCGC CGACTCACGC ATCGGTTACG ACTTCATCTA CCCCGGTTGC
GGTTACGGCG GTTCGTGTTT TGGCAAAGAC ATCCGTGCGT TGATTCACAG CGCCCGGGAG
GCCCATTGCT CCAACGATCT GCTGTCGGTG GTCGAGGCGA TCAACGAACG GCAGAAGAAC
AAACTCTTCG AGCGGGTCAA CGCGTTCTAT CAGGGCGACC TGCGCGGCAA GACCTTTGCC
CTGTGGGGGC TGGCGTTCAA ACCCAACACC GACGACATGC GCGATGCCCC CAGCCGCGTG
CTCATGGAAG CGTTGTGGGA GGCTGGCGCC AGCGTGCGGG CGTTCGACCC CGAGGCCATG
CAGGAAACCC AGCGTATTTA TGGCCATCGC AAGGACCTGA TGCTCATGGG CACGCCAGAG
TCGGCGCTCA ATGAAGCCGA TGCATTGATC GTCTGCACCG AATGGCAACA GTTCAAAGCT
CCGGATTTCG AGTTGATCCA GCAGCGGCTG AACGCACCGG TCATCTTCGA CGGGCGCAAT
CTGTACGACA CCGAACGACT GGCAAAACGC GGCTTCCACT ACTTCCCCAT CGGGCGTGGC
GAGTCATGCG ATCTGCCAAT CCCGCAAAAA CAGTGGACGG CCTGTAACCC GCTTGTCAGC
AGCCAGGTTG TGTAA
 
Protein sequence
MKISVFGSGY VGLVQATVLA EVGHDVVCMD IDQAKIDQLR QGQVHIYEPG LANLVRENLD 
QQRLCFTTDE QLAVEHAEVL FIAVGTPSRA DGSADLSGFF AVGEAIARHR REPLIIVEKS
TVPVGSGDAL RSHIDKALRQ AGRLLQFDIV SNPEFLKEGS AVNDCRRPDR IVIGCENEAV
RNVMRELYAP FNRNHERIMF MDLRSAELTK YAANCMLATK ISFINQIAEL AEHLGADVES
VRLGIGADSR IGYDFIYPGC GYGGSCFGKD IRALIHSARE AHCSNDLLSV VEAINERQKN
KLFERVNAFY QGDLRGKTFA LWGLAFKPNT DDMRDAPSRV LMEALWEAGA SVRAFDPEAM
QETQRIYGHR KDLMLMGTPE SALNEADALI VCTEWQQFKA PDFELIQQRL NAPVIFDGRN
LYDTERLAKR GFHYFPIGRG ESCDLPIPQK QWTACNPLVS SQVV