Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2696 |
Symbol | |
ID | 3368213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3272446 |
End bp | 3273840 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653044 |
Product | UDP-glucose 6-dehydrogenase |
Protein accession | YP_235773 |
Protein GI | 66045932 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0108367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.14753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCA GCGTTTTCGG TAGCGGATAT GTCGGCCTGG TACAAGCGAC CGTGCTTGCC GAAGTCGGCC ACGATGTGGT CTGCATGGAC ATCGATCAGG CCAAAATCGA CCAGTTGCGT CAGGGCCAGG TGCATATCTA CGAGCCTGGC CTGGCCAATC TGGTACGTGA AAACCTCGAC CAGCAGCGCC TGTGCTTCAC CACCGACGAG CAGCTGGCAG TGGAACATGC CGAGGTCCTG TTCATTGCGG TAGGCACGCC GTCCCGAGCC GATGGCTCCG CCGACCTGAG CGGCTTTTTC GCGGTGGGCG AAGCCATCGC CCGGCATCGA CGCGAACCGC TGATCATCGT CGAGAAGTCC ACCGTGCCGG TCGGCAGTGG CGACGCCTTG CGCAGCCACA TCGACAAGGC GCTGCGTCAG GCGGGCCGGC TGTTGCAGTT CGATATCGTC TCCAATCCGG AGTTTCTCAA GGAGGGCTCG GCGGTCAACG ATTGCCGGCG CCCGGACCGT ATTGTCATCG GCTGCGAAAA TGAAGCGGTG CGCAACGTCA TGCGCGAGCT GTATGCACCG TTCAACCGCA ATCATGAGCG GATCATGTTC ATGGACCTGC GCAGCGCCGA ACTGACCAAG TACGCCGCCA ACTGCATGCT GGCAACCAAG ATCAGCTTCA TCAACCAGAT CGCCGAACTG GCCGAGCATC TGGGCGCGGA CGTCGAGTCG GTGCGGTTGG GCATTGGCGC CGACTCACGC ATCGGTTACG ACTTCATCTA CCCCGGTTGC GGTTACGGCG GTTCGTGTTT TGGCAAAGAC ATCCGTGCGT TGATTCACAG CGCCCGGGAG GCCCATTGCT CCAACGATCT GCTGTCGGTG GTCGAGGCGA TCAACGAACG GCAGAAGAAC AAACTCTTCG AGCGGGTCAA CGCGTTCTAT CAGGGCGACC TGCGCGGCAA GACCTTTGCC CTGTGGGGGC TGGCGTTCAA ACCCAACACC GACGACATGC GCGATGCCCC CAGCCGCGTG CTCATGGAAG CGTTGTGGGA GGCTGGCGCC AGCGTGCGGG CGTTCGACCC CGAGGCCATG CAGGAAACCC AGCGTATTTA TGGCCATCGC AAGGACCTGA TGCTCATGGG CACGCCAGAG TCGGCGCTCA ATGAAGCCGA TGCATTGATC GTCTGCACCG AATGGCAACA GTTCAAAGCT CCGGATTTCG AGTTGATCCA GCAGCGGCTG AACGCACCGG TCATCTTCGA CGGGCGCAAT CTGTACGACA CCGAACGACT GGCAAAACGC GGCTTCCACT ACTTCCCCAT CGGGCGTGGC GAGTCATGCG ATCTGCCAAT CCCGCAAAAA CAGTGGACGG CCTGTAACCC GCTTGTCAGC AGCCAGGTTG TGTAA
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Protein sequence | MKISVFGSGY VGLVQATVLA EVGHDVVCMD IDQAKIDQLR QGQVHIYEPG LANLVRENLD QQRLCFTTDE QLAVEHAEVL FIAVGTPSRA DGSADLSGFF AVGEAIARHR REPLIIVEKS TVPVGSGDAL RSHIDKALRQ AGRLLQFDIV SNPEFLKEGS AVNDCRRPDR IVIGCENEAV RNVMRELYAP FNRNHERIMF MDLRSAELTK YAANCMLATK ISFINQIAEL AEHLGADVES VRLGIGADSR IGYDFIYPGC GYGGSCFGKD IRALIHSARE AHCSNDLLSV VEAINERQKN KLFERVNAFY QGDLRGKTFA LWGLAFKPNT DDMRDAPSRV LMEALWEAGA SVRAFDPEAM QETQRIYGHR KDLMLMGTPE SALNEADALI VCTEWQQFKA PDFELIQQRL NAPVIFDGRN LYDTERLAKR GFHYFPIGRG ESCDLPIPQK QWTACNPLVS SQVV
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