Gene Psyr_2690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2690 
Symbol 
ID3368207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3266168 
End bp3267181 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content61% 
IMG OID637653038 
Productglycosyl transferase family protein 
Protein accessionYP_235767 
Protein GI66045926 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.125609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.620007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACCGT ATCCGATCAA GTTCGTGTCG ATCGTCATCC CTGTCTACAA CGAGCGACAA 
AGCCTGCCAG AGTTGTTGCG CCGTACTGAA GCGGCCTGCG AACAGCTCGA CCACCGCTTC
GAAATCGTGC TGGTCGACGA TGGCAGCCGC GACGACTCGA CAGACATCCT CCAGCGGGCT
GCCGAGCGCG CCGACAGCCC CTTTGTCGCA GTGATCCTGA ATCGAAACTA CGGTCAGCAC
GCCGCCATCA TGGCCGGATT CGAGCAGTGC CAGGGCGACG TGGTCATCAC CCTCGATGCC
GACCTGCAGA ATCCTCCCGA GGAAATCCCT CGTCTGGTAA AGCTCGCTGA ACAGGGGTAC
GACGTGGTCG GCACGGTGCG CAGCAATCGT CAGGACTCCG CCTGGCGACG CTGGCCCTCG
AAACTCATCA ACCTGGCCGT GCAGCGCTCC ACCGGCGTGG CCATGAACGA TTACGGCTGC
ATGCTGCGCG CATACCGACG CACGATTGTC GACGCCATGC TCGCCTGCCG CGAGCGCAGC
ACGTTCATTC CGATTCTGGC GAACAGTTTT GCGCGACACA CCACCGAGGT GTTGGTCGAT
CACGCCGAAC GCGAGCACGG CGACTCCAAA TACAGCCCGA TGCGTCTGAT CAACCTCATG
TTCGACCTGA TCACCTGCAT GACCACCACG CCCTTGCGCC TGCTCAGCAT CATCGGCTTC
AGCATGGCGT TGCTCGGTGT CTTGTTCGCG GCGCTGCTGA TCGTTCTGCG CCTGATCTTC
GGCGCGTCAT GGGCCGGGGA CGGCATGTTC GTACTGTTTG CCGTGCTGTT CGTATTCACC
GGCGGGCAGT TCATCGGCAT GGGACTGCTG GGTGAATACC TGGGCCGGAT GTACAGCGAT
GTGCGTGCGC GTCCGCGGTT CTTCATCGAA AAAATCGTGC GCAGCTCGTC ACCGGTTGCC
ACCGACAGCA TTGATTCCTC TGTAACTCCC TATATGAACA AGGTCGCGCC ATGA
 
Protein sequence
MKPYPIKFVS IVIPVYNERQ SLPELLRRTE AACEQLDHRF EIVLVDDGSR DDSTDILQRA 
AERADSPFVA VILNRNYGQH AAIMAGFEQC QGDVVITLDA DLQNPPEEIP RLVKLAEQGY
DVVGTVRSNR QDSAWRRWPS KLINLAVQRS TGVAMNDYGC MLRAYRRTIV DAMLACRERS
TFIPILANSF ARHTTEVLVD HAEREHGDSK YSPMRLINLM FDLITCMTTT PLRLLSIIGF
SMALLGVLFA ALLIVLRLIF GASWAGDGMF VLFAVLFVFT GGQFIGMGLL GEYLGRMYSD
VRARPRFFIE KIVRSSSPVA TDSIDSSVTP YMNKVAP