Gene Psyr_2689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2689 
Symbol 
ID3368206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3265023 
End bp3266171 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content60% 
IMG OID637653037 
ProductUDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 
Protein accessionYP_235766 
Protein GI66045925 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.284538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.620007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAA CTTTTCTTGC CTTTTCACGG CCGTCCATTG GCGATGAAGA AATTGCTGCA 
GTGACGCGCG TGCTGCGTTC CGGATGGATC ACCACCGGAC CGGAATGTCA GAAGCTGGAG
GAAGAGTTCG CCGCGCGGGT CGGCGCGCGG CATGCAGTGG CATTGTCTTC GGCCACCGGG
GCAATGCACG TTGCGCTGCT GGCGCTGGGT GTAGGGCCTG GCGATGAAGT GATTACGCCG
TCGCAAACCT GGGTGTCGAC AGCCAATATG ATCTGCCTGC TGGGAGCCAC TCCGGTGTTT
GTCGATGTCG ACCGCGACAC CCTGATGACC AGCGCCGCGT TGATAGAGCA TGCCATCACT
CCGCGGACCA AGGCGATCGT GCCAGTGCAT TATGCAGGCG CGGCATTCGA TCTTGACCCG
CTGTATGCGC TGGCCGACCG GCACGGCATC ACCGTGATCG AAGACGCTGC GCATGCTGCC
GGCACTGCTT ACCAAGGACG CCCGGTCGGC CAGCAGGGCA CTGCGATCTT TTCGTTTCAC
GCGATCAAGA ACATGACCTG TGCCGAAGGC GCGATGCTGG TCACCGACAA TGCACGGCTG
GCTGATCGGG TGCGTCAGCT TAAATTCCAT GGCCTGGGTG TCGATGCCTA CGATCGCCTG
ACCCTGGGTC GCAAACCGCA GGCCGAGGTC ATGGAGCCTG GCTTCAAATA CAACCTGGCC
GACATTAATG CGAGCATTGC GCGGGTGCAG TTGCAGCGCC TCGACGCCAT CAATGCACAG
CGCCAGGCGC TCGCCAGCCA TTACCTCGAA CGACTGGCCA ATAGCCCCGT TCTGCCTCTC
GCCCTGCCCC GGTATGCCCA GCAACACGCT TGGCACCTGT TCATTCTGCG CATTGATCCC
GAGCGCTGCG GGCTGGATCG CGATGCCTTC ATGAAGGCCT TGCAAGCGCG AAATATCGGC
ACCGGCATCC ACTTCATCGC GACCCACCTG CACAGCTATT ACCGCAAGCG TTTCCCGGAT
GTACGCCTGC CCGACACTGA ATGGAATTCA TCACGGCTGT GTTCCATCCC CCTGTTCCCC
GACATGAGCC TCGATGATGT CGAGCGGGTT GTCGGTGCCA TTGAATCGAC CCTGGAATCC
AGCCATTGA
 
Protein sequence
MSQTFLAFSR PSIGDEEIAA VTRVLRSGWI TTGPECQKLE EEFAARVGAR HAVALSSATG 
AMHVALLALG VGPGDEVITP SQTWVSTANM ICLLGATPVF VDVDRDTLMT SAALIEHAIT
PRTKAIVPVH YAGAAFDLDP LYALADRHGI TVIEDAAHAA GTAYQGRPVG QQGTAIFSFH
AIKNMTCAEG AMLVTDNARL ADRVRQLKFH GLGVDAYDRL TLGRKPQAEV MEPGFKYNLA
DINASIARVQ LQRLDAINAQ RQALASHYLE RLANSPVLPL ALPRYAQQHA WHLFILRIDP
ERCGLDRDAF MKALQARNIG TGIHFIATHL HSYYRKRFPD VRLPDTEWNS SRLCSIPLFP
DMSLDDVERV VGAIESTLES SH