| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2678 |
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| Symbol | |
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| ID | 3368195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3249496 |
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| End bp | 3250998 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637653026 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_235755 |
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| Protein GI | 66045914 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00233729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.64261 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCG CACGCGTCGT GACAGGAACA TTGTTATTGC TGGCCGCCAA CGCTGCCTTC
GCCGAATCGA CGTTGCGCAT CGGCATTCAG GACGATCCCG ATGTGCTGGA TCCGCACCGT
TCGCGCACCT ACTCCGGCCG CCTGGTCTAC ACCGCGCTGT GCGACAAACT GGTGGACGTC
AACCCGGACC TGACCTACTC GCCGCAACTG GCCACCGCCT GGAACTGGAG CGAAGACGGT
AAAACCCTGA CCATGACGTT GCGCGAAGGC GTGACGTACC ACGATGGCGA ACCTTTTGAT
GCCGCCTCGG TGAAGTTCAA CCTTGATCGC GCCCGCACCC TCCCCGACTC CCTGCGCAAA
AGCGAGCTGG CCTCGGTGGA CAGCGTCGAG GTGATTGACG CAAAAACTGT CGCCATCAAG
CTCAAGCAAG CCGATGCCAC GCTGGTTTCG CAACTGTCGG ACCGTGCCGG GATGATGCTC
GCGCCGAAAG CCGCGCAAGG TGAGTTCGCC TCCAACCCGG TCTGCTCCGG CCCTTACAAA
TTCGTGCAGC GCGTGCAGCA GGATCGAATC GTACTGGAGC GTTTTGACAA CTACTGGAAT
AAACAGGCTT ATCACTTCGA CAAAGTGGTG TTCCTGCCGA TTCCGGACAC CTCGGTGCGC
CTGGCCAACC TGCGCTCCGG CGATCTGGAC ATCATCGAGC GCGTGGCGCC AACCGATGTG
AAAACCGTCA AGGGCGACAG CAAGCTGGCG ATCTACAACA CACCGGGCCT GGGCTACATG
CAACTGATGT TCAACATCGG CAATGGTGAA AAAGCCAACT CGCCGATGGG CAAGGACAAG
CGCGTACGCA AGGCGTTTGA GCTGTCCATC GACCGCGATG CCATTAATCA GGTGGTGTTC
GAGGGTCTGT ACGCACCAAG CGCTCAGCCG TTCCCGAAAA ACAGCCCGTA TTACGACAAG
GAACTGCCGA TCCCTACTCG CGATATCGAG AAAAGCAAAG CGCTGCTGGC GCAGGCCGGC
GTGAAACTGC CGTTGGCGGT GGACCTGAAA GTGGCCAACA ACCCCATCGC GCAACAGGTC
GGGCAGATCA TTCAGGCCAT GGCTGAAGAA GCGGGCTTCA AGGTCAACCT GATTGCCACG
GAATACGCGA CGATGCTCAG CGAACAGGCG AGTGGCAACT TCCAGATCGG CATGAGCGCC
TGGTCGGGTC GTCCTGATCC GGATGGCGAC ATCCATCAGT TCGTGACCTG CAAAGGCGGC
CAGAACGACG GCAAGTACTG CAACGCCAGA CTCGACGAAC TGCTCAACAA GGCGCGCACC
GTGAACGACG TTGCACAACG CCAGGCGCTG TACAACGACG CGCTGCGCTT GCTGGCCGAT
GAAGTACCCA CCGCCTACCT GTATTTCGAC CCGCGAATCA TTGCCATGCG TAACAACGTG
ACCGGTTTTG TCCCTAACCC GGACGGTCTG ATTCGTCTGA ACAATGTCGC GTTCAAGCCA
TGA
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| Protein sequence | MKIARVVTGT LLLLAANAAF AESTLRIGIQ DDPDVLDPHR SRTYSGRLVY TALCDKLVDV
NPDLTYSPQL ATAWNWSEDG KTLTMTLREG VTYHDGEPFD AASVKFNLDR ARTLPDSLRK
SELASVDSVE VIDAKTVAIK LKQADATLVS QLSDRAGMML APKAAQGEFA SNPVCSGPYK
FVQRVQQDRI VLERFDNYWN KQAYHFDKVV FLPIPDTSVR LANLRSGDLD IIERVAPTDV
KTVKGDSKLA IYNTPGLGYM QLMFNIGNGE KANSPMGKDK RVRKAFELSI DRDAINQVVF
EGLYAPSAQP FPKNSPYYDK ELPIPTRDIE KSKALLAQAG VKLPLAVDLK VANNPIAQQV
GQIIQAMAEE AGFKVNLIAT EYATMLSEQA SGNFQIGMSA WSGRPDPDGD IHQFVTCKGG
QNDGKYCNAR LDELLNKART VNDVAQRQAL YNDALRLLAD EVPTAYLYFD PRIIAMRNNV
TGFVPNPDGL IRLNNVAFKP
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