Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2675 |
Symbol | |
ID | 3368192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3246619 |
End bp | 3247356 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637653023 |
Product | transcriptional regulator GntR |
Protein accession | YP_235752 |
Protein GI | 66045911 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.159035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAGGT TCGACCCTGA CATTCCCATC GACAACTCTT CGAAACTGGC GCTGGATGCG TTGCGCCAGA TCGTTGCCCA GCATGCAGCC TTCCCCCAGC GGGCATTGCC TACCGAGCGG GATCTGGCGG CCGATTTCGG GGTCAGCCGA CGGGCAGTTC GTCGCGCCCT GTCGGTGCTG GAAGCCGAAG GCCAGGTCTG GCGCCGGCAA GGTAAAGGGA CCTTTGTCGG ACCTACTCCA CCCAGCGCCG CCATGAGCTT CGCGCGGCTT TCCGGGCGGA CCAATTTCAC CGAGGTCATG GAAGCGCGCC TGCATCTGGA GCCGGCACTT GCCTCATTGG CCGCGGTACG GGCCAATGGT GAGCAGATGG CGATTCTGCG CCGCCTTGCC GAGCGCACTA CTCGCCAGCA GGTCGCCGAG CAGACCGATG CCGAAGGCAT CGAGCTGTGG GACAGCGCCC TGCACCGCGC CATTGCCGAA GCGGCGGGTA ATCGACTGAT GCTGGACATC TTCGAAATGC TCGATGCGAT CCGTCTGGAC CCCGCCTGGC GCGACTTGCG TCACCGGGCG CGTAATGCCG ACCGCCTCGA CACCTACAGC CACGATCACG ACGACATCGT CAGCGCCATT GAAAGCCGCG ATCCGATCAA GGCCGCCACT GCCATGCGCG GCCATCTACG TGCGCTGCAA CAGGCCCTGA ACACCGTCAT CAACCAAGAC CTGGAGGCCA GCCTATGA
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Protein sequence | MQRFDPDIPI DNSSKLALDA LRQIVAQHAA FPQRALPTER DLAADFGVSR RAVRRALSVL EAEGQVWRRQ GKGTFVGPTP PSAAMSFARL SGRTNFTEVM EARLHLEPAL ASLAAVRANG EQMAILRRLA ERTTRQQVAE QTDAEGIELW DSALHRAIAE AAGNRLMLDI FEMLDAIRLD PAWRDLRHRA RNADRLDTYS HDHDDIVSAI ESRDPIKAAT AMRGHLRALQ QALNTVINQD LEASL
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