Gene Psyr_2675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2675 
Symbol 
ID3368192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3246619 
End bp3247356 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content64% 
IMG OID637653023 
Producttranscriptional regulator GntR 
Protein accessionYP_235752 
Protein GI66045911 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.159035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGGT TCGACCCTGA CATTCCCATC GACAACTCTT CGAAACTGGC GCTGGATGCG 
TTGCGCCAGA TCGTTGCCCA GCATGCAGCC TTCCCCCAGC GGGCATTGCC TACCGAGCGG
GATCTGGCGG CCGATTTCGG GGTCAGCCGA CGGGCAGTTC GTCGCGCCCT GTCGGTGCTG
GAAGCCGAAG GCCAGGTCTG GCGCCGGCAA GGTAAAGGGA CCTTTGTCGG ACCTACTCCA
CCCAGCGCCG CCATGAGCTT CGCGCGGCTT TCCGGGCGGA CCAATTTCAC CGAGGTCATG
GAAGCGCGCC TGCATCTGGA GCCGGCACTT GCCTCATTGG CCGCGGTACG GGCCAATGGT
GAGCAGATGG CGATTCTGCG CCGCCTTGCC GAGCGCACTA CTCGCCAGCA GGTCGCCGAG
CAGACCGATG CCGAAGGCAT CGAGCTGTGG GACAGCGCCC TGCACCGCGC CATTGCCGAA
GCGGCGGGTA ATCGACTGAT GCTGGACATC TTCGAAATGC TCGATGCGAT CCGTCTGGAC
CCCGCCTGGC GCGACTTGCG TCACCGGGCG CGTAATGCCG ACCGCCTCGA CACCTACAGC
CACGATCACG ACGACATCGT CAGCGCCATT GAAAGCCGCG ATCCGATCAA GGCCGCCACT
GCCATGCGCG GCCATCTACG TGCGCTGCAA CAGGCCCTGA ACACCGTCAT CAACCAAGAC
CTGGAGGCCA GCCTATGA
 
Protein sequence
MQRFDPDIPI DNSSKLALDA LRQIVAQHAA FPQRALPTER DLAADFGVSR RAVRRALSVL 
EAEGQVWRRQ GKGTFVGPTP PSAAMSFARL SGRTNFTEVM EARLHLEPAL ASLAAVRANG
EQMAILRRLA ERTTRQQVAE QTDAEGIELW DSALHRAIAE AAGNRLMLDI FEMLDAIRLD
PAWRDLRHRA RNADRLDTYS HDHDDIVSAI ESRDPIKAAT AMRGHLRALQ QALNTVINQD
LEASL