Gene Psyr_2654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2654 
Symbol 
ID3368171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3224856 
End bp3225662 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content54% 
IMG OID637653002 
Productintegrase catalytic subunit 
Protein accessionYP_235731 
Protein GI66045890 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.596052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.523017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGCCC TTCTGACGCT GGCGGGCCTG GCGCGCAGCA CGTTTTACTA TCAGGCTCAG 
GTGCAATCCA GACCCGATCC AGATGCAGCT CTGAAGCAGG AGATAGAGCG TGTTTATCAC
GAGGAGAGAG GTCTTTATGG GGCTCGGCGT ATCACGGCGG TCATTCGCAA CTCAGGCACG
TTGGTCAACA AGAAGGTTGT GGAGCGCTTG ATGGCTGAAC TGGGCCTCAG ATCAGTTGTG
CGACCCAAGA AGTACCGCTC CTATAAGGGC ACCGTCGGGA AAATTGCGCC GAATTTGCTG
GAGCGCAAGT TCACGGCGCA ACGCCCGAAC CAGAAATGGG TGACCGATGT GACCGAGTTT
AAAGTGGCCA ATCGAAAGCT GTATCTCTCG CCCGTGATGG ACCTGTACAA CGGTGAGATC
GTGGCGTACG AAGTGTCTAC CAGGCCGTGC TTCGAGCTGG TCACCAATAT GCTGGACAAG
GCTCTCCAGC AGTTGCAGGA CGAGCCGAAG CTTGTGATGC ACTCGGATCA GGGCTGGCAG
TATCAACACG CGCAGTACCG TCAGAAACTG GCGGTAAAGG GTGTAAAGCA AAGCATGTCT
CGTAAGGGAA ATTGCCTGGA CAATGCCGCA ATGGAAAGCT TCTTTGGTAC GCTGAAGTCC
GAGTTTTTCT ATTTGAAACG ATTTGAAAGC ATAGAAGAGC TGAAGGCAGG TCTGGATGAG
TACATCCGCT ACTACAACCA TGACCGCATC AAGCTGAAGC TAAACGGCTT GAGCCCCGTA
AAATACAGGG CTCAGGCGGC GAGCTAA
 
Protein sequence
MCALLTLAGL ARSTFYYQAQ VQSRPDPDAA LKQEIERVYH EERGLYGARR ITAVIRNSGT 
LVNKKVVERL MAELGLRSVV RPKKYRSYKG TVGKIAPNLL ERKFTAQRPN QKWVTDVTEF
KVANRKLYLS PVMDLYNGEI VAYEVSTRPC FELVTNMLDK ALQQLQDEPK LVMHSDQGWQ
YQHAQYRQKL AVKGVKQSMS RKGNCLDNAA MESFFGTLKS EFFYLKRFES IEELKAGLDE
YIRYYNHDRI KLKLNGLSPV KYRAQAAS