Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2654 |
Symbol | |
ID | 3368171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3224856 |
End bp | 3225662 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637653002 |
Product | integrase catalytic subunit |
Protein accession | YP_235731 |
Protein GI | 66045890 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.596052 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.523017 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGCCC TTCTGACGCT GGCGGGCCTG GCGCGCAGCA CGTTTTACTA TCAGGCTCAG GTGCAATCCA GACCCGATCC AGATGCAGCT CTGAAGCAGG AGATAGAGCG TGTTTATCAC GAGGAGAGAG GTCTTTATGG GGCTCGGCGT ATCACGGCGG TCATTCGCAA CTCAGGCACG TTGGTCAACA AGAAGGTTGT GGAGCGCTTG ATGGCTGAAC TGGGCCTCAG ATCAGTTGTG CGACCCAAGA AGTACCGCTC CTATAAGGGC ACCGTCGGGA AAATTGCGCC GAATTTGCTG GAGCGCAAGT TCACGGCGCA ACGCCCGAAC CAGAAATGGG TGACCGATGT GACCGAGTTT AAAGTGGCCA ATCGAAAGCT GTATCTCTCG CCCGTGATGG ACCTGTACAA CGGTGAGATC GTGGCGTACG AAGTGTCTAC CAGGCCGTGC TTCGAGCTGG TCACCAATAT GCTGGACAAG GCTCTCCAGC AGTTGCAGGA CGAGCCGAAG CTTGTGATGC ACTCGGATCA GGGCTGGCAG TATCAACACG CGCAGTACCG TCAGAAACTG GCGGTAAAGG GTGTAAAGCA AAGCATGTCT CGTAAGGGAA ATTGCCTGGA CAATGCCGCA ATGGAAAGCT TCTTTGGTAC GCTGAAGTCC GAGTTTTTCT ATTTGAAACG ATTTGAAAGC ATAGAAGAGC TGAAGGCAGG TCTGGATGAG TACATCCGCT ACTACAACCA TGACCGCATC AAGCTGAAGC TAAACGGCTT GAGCCCCGTA AAATACAGGG CTCAGGCGGC GAGCTAA
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Protein sequence | MCALLTLAGL ARSTFYYQAQ VQSRPDPDAA LKQEIERVYH EERGLYGARR ITAVIRNSGT LVNKKVVERL MAELGLRSVV RPKKYRSYKG TVGKIAPNLL ERKFTAQRPN QKWVTDVTEF KVANRKLYLS PVMDLYNGEI VAYEVSTRPC FELVTNMLDK ALQQLQDEPK LVMHSDQGWQ YQHAQYRQKL AVKGVKQSMS RKGNCLDNAA MESFFGTLKS EFFYLKRFES IEELKAGLDE YIRYYNHDRI KLKLNGLSPV KYRAQAAS
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