Gene Psyr_2653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2653 
Symbol 
ID3368170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3224311 
End bp3224826 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content53% 
IMG OID637653001 
ProductISPsy8, transposase OrfA 
Protein accessionYP_235730 
Protein GI66045889 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.223836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.730107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGT ATTCAGAGCA ATTCAAACTC ACCGTCGTCA AAGCGTACCT TGAAGGCAAC 
ATCGGCTTTC GCAAGGTGGC CAGCCAGTTC TCGATCGATT TCAGCCTGCT TCGACGCTGG
GTCGCCAATT ACAAGAGCCA TGGGCACACA GGCCATCGCA AGCCTGGTCT TCGGTACAGT
AAAGCCTTCA AACGCTCAGT GCTTGAGCAC AAGCGCGAGC ACGGGCTGTC GCTTCGCCAG
ACCGCAGCGC ATTTTGGTAT TGGTGATCCT GGCCAAATAG TCATTTGGGA ACAGCAGCAT
TACAGTGACG GTCTAGCCCC GCGTGTTCCC ACAAGAAGAA AGCCTGCTGC CATGCCCAAG
AAGCCTTATC CCACCGAACC CGTAACCGCT GACGATACGC ACAAGACACG CGACCAGTTA
ATGGCCGAGC TTGAATACCT GCGCATGGAG AACGCTTACC TAAAAAAGTT GGAAGAGTTG
AAGGAGCAGC AACGACGGCA AAAGAAAAAG CCCTGA
 
Protein sequence
MAKYSEQFKL TVVKAYLEGN IGFRKVASQF SIDFSLLRRW VANYKSHGHT GHRKPGLRYS 
KAFKRSVLEH KREHGLSLRQ TAAHFGIGDP GQIVIWEQQH YSDGLAPRVP TRRKPAAMPK
KPYPTEPVTA DDTHKTRDQL MAELEYLRME NAYLKKLEEL KEQQRRQKKK P