| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2636 |
|---|
| Symbol | |
|---|
| ID | 3368153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 3202967 |
|---|
| End bp | 3203407 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637652984 |
|---|
| Product | TspO/MBR-related protein |
|---|
| Protein accession | YP_235713 |
|---|
| Protein GI | 66045872 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.552731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTCT TCATTTTCCT TCTAGCCTGC TGCGCCGCCG GAGCAACCGG CATCATCTTC
AAGCCGGGAG CCTGGTACGA ATCTCTTGAA AAGCCGAGCT TCACGCCGCC TGACTGGGCG
TTTCCGGTGG CGTGGACGAC GATTTATCTG CTTCTCGCCT GGGCAGGCTA TCGCCTGACG
CTGATCCCCG GCAGCGAGGT CGTGCTGGCC CTGTGGGCGG CTCAAATTGC CCTGAATACG
TTGTGGACGC CGGTATTTTT TGGCGCGAAC CGCCTGGTTG CTGCGATGGT GATTCTGGTT
CTGCTGTGGG TCGTGGTTGC CGCGATGATC GTAATGGCCT TGCAACTGGA CATCATCACC
GGGCTGATCC TGTTCCCTTA CCTGGTCTGG CTCTCGGTAG CAGCGGCGCT GAACTTCTCC
ATTCTGCGCC ATAACCGATA A
|
|---|
| Protein sequence | MTFFIFLLAC CAAGATGIIF KPGAWYESLE KPSFTPPDWA FPVAWTTIYL LLAWAGYRLT
LIPGSEVVLA LWAAQIALNT LWTPVFFGAN RLVAAMVILV LLWVVVAAMI VMALQLDIIT
GLILFPYLVW LSVAAALNFS ILRHNR
|
|---|
| |