Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2623 |
Symbol | |
ID | 3368140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3182993 |
End bp | 3184252 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637652971 |
Product | hypothetical protein |
Protein accession | YP_235700 |
Protein GI | 66045859 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00179753 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGCA TCACTATCGA CGCCACGTCC CACCCTGCCG AGCTGCTGAA CACACTGGAG AGCAAGGTTG CGTTGCTGCG TCGCCACTTT CCGCCCAGCG TGTCCAGGCT GTTTGCCATT CCGCGTGCGG GTACCGACGG CACGCTGCAA TGGTGGTCTG AACTAGGCGG TCAGCACTTG CCGTATCACA GCCTCGACGC TGGCGCGCAA CAGGCGTTGC TCGCACGCTA CCTGCAGCGC CAGCAAGCCA TTGTGCAGTT GGCGGATGAG CTGCAGGCGC GCGATAGAGC TGATGAGGCC AATAGTCTTC GTACGCTTGT CGGCGCCCCT GCGCTGAACA ACCTTTATAG TCTCAATGAC GAGCCTGTAG TCATCCGCTG GGGTATGGCG CAGCCAGTGG CCCCTGCAAT CCCGTCGACA TTACCAGTGT CATCACTCGC CAGCCCGGCA TCAAGGCGAT GGTGGCTGCG TATTCCGGTT TTGCTGCTAT TACTGCCGTT ACTGTTGATA CTACTGTGGC TGCTATGGGC ATGGCGCGGG AGCGTGTGGA ACGTGTTCAA TACGGCCCCT ATGGGTAATT ACTCATGCAC ACAGGGTGTG CCCGCCCCTG ACTTTGCCGT GGTGCTGGAT ACTTCCGGCT CGATGAATCT GAACATCGAT ACGTCTTCTG AAGACGAGGC CTGGATGTAT CAGGTCGGTG GCGCGCTTCC CGCCGACAAC CCGAGAAAAG CTCGCGTGCT TGCTGAACCG ACTCGCCTGA CTGTCGCCAA GCAAGCCTTT GGCGCGATGC TCGGGCAACT GCACCCAGAC ATTGATACAC GCTTGATCAC TTTTCAAGGC TGTGAGGGCA CGGTCGATCA AGGCGTGTTC CAGCGTGATG CGCGTCAGCA ATTGCTGGCC GGGGTTGGAA AACTCAGCGC GGACGGGGGT ACGCCATTAG TCGCCAGCCT TATCAAGTCG GCAAGTCTGG TGGACGGGCG TTTTAAAGAT GCCTTGGTGG TCATGTTTGT CGATGGCGAG GACGGTTGTG GGCAAAACGC TTGCGAGGTG TCCGCCCGTA TCGCCCGTCA GCAGCCAAGA TTGCGGATCA ATGTTGTCAA TATCAGCGAT AGCAAGCTTT CAAACTGTAT CGCTGAAAAT ACCGGTGGCC GTGTATATGC CGCGCGCGAA GCGGGAGAGG TACAAAGGAT GCTGCGCGAA GCCATGGAAG AAGTCGCAGC GGCCCCCGCG TGTACAGAGA AAAAAATCCC CGGCGAGTGA
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Protein sequence | MQRITIDATS HPAELLNTLE SKVALLRRHF PPSVSRLFAI PRAGTDGTLQ WWSELGGQHL PYHSLDAGAQ QALLARYLQR QQAIVQLADE LQARDRADEA NSLRTLVGAP ALNNLYSLND EPVVIRWGMA QPVAPAIPST LPVSSLASPA SRRWWLRIPV LLLLLPLLLI LLWLLWAWRG SVWNVFNTAP MGNYSCTQGV PAPDFAVVLD TSGSMNLNID TSSEDEAWMY QVGGALPADN PRKARVLAEP TRLTVAKQAF GAMLGQLHPD IDTRLITFQG CEGTVDQGVF QRDARQQLLA GVGKLSADGG TPLVASLIKS ASLVDGRFKD ALVVMFVDGE DGCGQNACEV SARIARQQPR LRINVVNISD SKLSNCIAEN TGGRVYAARE AGEVQRMLRE AMEEVAAAPA CTEKKIPGE
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