| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2621 |
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| Symbol | |
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| ID | 3368138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3178778 |
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| End bp | 3179881 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637652969 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_235698 |
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| Protein GI | 66045857 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.15044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAAGA TACACGTTTA TGGGCTGCTG ACGCTGGCGG TGTTGGGCGT TTCGGGCTGG
CTATTGTCTG GCCGCGCAGA GCCGCCCCCG GCCGCTGCGG CGCCGCCGGC CACCAGCCTG
ACGGTAGAGG CAGTGCAACC GCGCCGCGAA GACTGGCCGC AGGAACGGGT GGCCAGTGGT
GCGCTTGCGC CGTGGCAGGA AGCCGTGATC AGTGCAGAGA CCGGAAGCTT GCGTATCGCC
AGCCTGAAGG CTGATATCGG CGATCAGGTG AAGAAGGGCC AGGTTTTGGC GACCCTGGCC
GATGACAGCG TGCTGGCTGA GGAAAACAAG CAGAAGTCGG CGGCCGCCCA GGCCACTGCG
CAACTGCAGG AAGCCCGCTC CAATGCCAGG CGGGCGGCCT CGGTAGGTCA GAGCGGCGCC
CTGTCCGAGC AGAAACTGGA AGAGTACCGG GTCAAGGTGC AGACCGCCGA AGCTGACCTG
GCCTCGGCGA ATGCCGATCT GCGCAGCATC CGGATCAAGC TTGCGCAGAC GCGCATCGTC
GCGGTGGATG ACGGGATTAT CTCCGGGCGC AAGGCCTTGC TTGGCGATGT GGTATCGGCG
GGCAGTGAAA TGTTCAGGAT GATCCGCGAT GGCCGCATCG AGTGGCAGGC GGAACTGGAT
GCCCAGCAAC TGCCAGGCGT CAAGGCCGGT CAGCTCGCCC GTGTGACGCT GCCCGGTGGT
ATTGCGGTGC AAGGGCGCGT GCGGCTGGTC TCGCCAATGC TCGACAGCAA GACCAGCAGG
GCGCTGGTCT ATGTCTCCCT GCCGGTGGGG TCTGTGGCGC GCGCCGGCAT GTACGCCAGC
GGTCGCATCG AACTGCCGTC CAGCCCGGCG CTGACGGTTC CGGACACCAG CGTGATCCTG
CGCGACGGGC GCTCTTATGT GTTTGTGCTG GGCAAGGACA TGCGCGTCAG CCAACAGGTG
GTCGAGGTCG GAAGACGTCG TGGATCGGCG CTGGAAATCC TCGGCGGCCT GCCAGAGCAG
GCACAGATCG TCCGTAGCGG TGGGGCCTTT CTCAATGACG GGGCCAGCGT GACACTGGTC
AACGCCGAGG CCCGTGTGCA ATGA
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| Protein sequence | MRKIHVYGLL TLAVLGVSGW LLSGRAEPPP AAAAPPATSL TVEAVQPRRE DWPQERVASG
ALAPWQEAVI SAETGSLRIA SLKADIGDQV KKGQVLATLA DDSVLAEENK QKSAAAQATA
QLQEARSNAR RAASVGQSGA LSEQKLEEYR VKVQTAEADL ASANADLRSI RIKLAQTRIV
AVDDGIISGR KALLGDVVSA GSEMFRMIRD GRIEWQAELD AQQLPGVKAG QLARVTLPGG
IAVQGRVRLV SPMLDSKTSR ALVYVSLPVG SVARAGMYAS GRIELPSSPA LTVPDTSVIL
RDGRSYVFVL GKDMRVSQQV VEVGRRRGSA LEILGGLPEQ AQIVRSGGAF LNDGASVTLV
NAEARVQ
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