| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2618 |
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| Symbol | |
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| ID | 3368135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3173564 |
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| End bp | 3175525 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637652966 |
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| Product | ABC transporter |
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| Protein accession | YP_235695 |
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| Protein GI | 66045854 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.094569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGAG CTCTTCTGGA ACTCAACGGT GTCACCCGTC GTTTCGTCGC CGGCGAAAAG
GACTTCATCG CGCTTAATGA CATCAACCTC ACGATCAATG CCGGCGAACT GGTTGCCATT
ACCGGGGCCT CGGGTTCCGG CAAGTCAACG CTGATGAACG TGCTGGGCTG TCTGGACCAC
CCCAACAGCG GCAGTTACAA GGTCGACGGG CGTGAAACCG GTACGCTTAC CGATGATGAG
CTGGCAGAGC TGCGTCGCGA TCACTTCGGT TTCATTTTCC AGCGTTATCA CCTGTTGCCG
CACCTGGCGG CGATCCAGAA TGTCGAAATG CCAGCTATCT ACGCAGGCAC CGGCAAGGGC
ATGCGCGTGG AGCGCGCGCA GAAGCTGCTC GAGCGTCTGG GCCTGTCCGG GCATCTGGAG
CATCGGCCAA GCCAGTTGTC AGGCGGCCAG CAGCAGCGGG TGAGTATCGC CCGGGCCTTG
ATGAACGGCG GCGAGATCAT TCTGGCCGAC GAACCCACTG GCGCCCTCGA CAGCGTGAGC
GGCAAGGAGG TGATGAATAT CCTCCTGGAG CTCAACAGCG CCGGACACAC CGTGATTTTG
GTGACTCACG ACGAGAAGGT GGCAGCGCAC GCCGAGCGCA TCATCGAGAT GCGTGACGGC
GAGATCATCG CCGACCGGGT CAACACCGAT CGCCCGATCA TCAACGAAAA AACCACCGAG
CGCCTGCCGA CCAAACCCAG GCAGGGCAAC CGGCTGATGG CTAACATCGG CCTGTTCCAG
GAAGCTTTCG TCATGGCGTG GGTGGCGCTG ATCTCGCATC GCATGCGCAC GCTGCTGACC
ATGCTCGGGA TCATCATCGG CATCACCTCG GTGGTGTCGA TCGTAGCGAT CGGCGAAGGG
GCCAAGCGCT ATGTGCTCAA GGACATCCAG GCCATCGGCA GCAATACCAT CGAGGTGTTC
CCAGGCAGTG ACTTTGGCGA CACCAAGTCC ATGGATATCC AGACCCTGGC GCTGTCCGAT
GTGGCGGCGT TGAGCAGTGA GTACTACATC GACAGCGCCA CACCGAATAT CGGCCGCAAC
CTGCTGGTGC GCTACCGAAA TATCGACGTA TCGGCGACGG TGAGCGGGGT CAGCCCGAGC
TACTTCCAGG TGCGTGGCAC GAAGATGGGC CTGGGGGTGG GTTTCAACAA GGATGACGCC
CGGCGGCAGG CACAGGTGGT GGTGATCGAT CACAACACGC GGATTCGCCT GTTCGGTCCC
AAGGTCGACC CGCTGGGCCA GGTGATCCTG GTGGGTAACC TGCCGTGTAC GGTGATCGGC
GTGACCGAGA ACAAGAAAAA CATCTTCGAC ACCAGCAAGA ACCTGAATAT CTGGATGCCC
TACGAAACCG CCTCCGGACG CCTGCTGGGT CAGACCTACC TGGACGGCAT CACCGTGCGG
GTCAAGGACG GACAGCCAAG CAAGGTGGTC GAGGACAACG TCAACAAGCT GTTGCAAAAG
CGGCACGGGA CCAAGGACTT CTTCACCTAC AACCTCGACA GCGTGATGCA AACGGTGCAG
AAGACCAGTC AGTCGCTGGC CCTGTTGCTG TCGTTGATCG CGGTGATCTC GCTGGCGGTC
GGCGGCATCG GGGTGATGAA CATCATGCTG GTGTCGGTCA CGGAACGGAC GCGCGAGATC
GGCATTCGCA TGGCCGTCGG GGCACGCCAG TCGGATATCC GTCAGCAGTT TCTGGTGGAG
GCGGTGATGG TCTGCCTGAT TGGCGGGGTC ATCGGCATCA GCCTGTCGTT CGTGATCGGC
TATGTGTTTT CACTGCTGGT CAAGGAGTGG CAGATGGTGT TCTCCCTGGG CTCGATTGTC
ACTGCGTTCA TCTGCTCGAC ATTGATCGGC ATCGTGTTCG GCTTCGTACC GGCACGTAAC
GCGGCACAGC TCGATCCGAT CGAGGCACTG GCACGGGATT GA
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| Protein sequence | MSRALLELNG VTRRFVAGEK DFIALNDINL TINAGELVAI TGASGSGKST LMNVLGCLDH
PNSGSYKVDG RETGTLTDDE LAELRRDHFG FIFQRYHLLP HLAAIQNVEM PAIYAGTGKG
MRVERAQKLL ERLGLSGHLE HRPSQLSGGQ QQRVSIARAL MNGGEIILAD EPTGALDSVS
GKEVMNILLE LNSAGHTVIL VTHDEKVAAH AERIIEMRDG EIIADRVNTD RPIINEKTTE
RLPTKPRQGN RLMANIGLFQ EAFVMAWVAL ISHRMRTLLT MLGIIIGITS VVSIVAIGEG
AKRYVLKDIQ AIGSNTIEVF PGSDFGDTKS MDIQTLALSD VAALSSEYYI DSATPNIGRN
LLVRYRNIDV SATVSGVSPS YFQVRGTKMG LGVGFNKDDA RRQAQVVVID HNTRIRLFGP
KVDPLGQVIL VGNLPCTVIG VTENKKNIFD TSKNLNIWMP YETASGRLLG QTYLDGITVR
VKDGQPSKVV EDNVNKLLQK RHGTKDFFTY NLDSVMQTVQ KTSQSLALLL SLIAVISLAV
GGIGVMNIML VSVTERTREI GIRMAVGARQ SDIRQQFLVE AVMVCLIGGV IGISLSFVIG
YVFSLLVKEW QMVFSLGSIV TAFICSTLIG IVFGFVPARN AAQLDPIEAL ARD
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