Gene Psyr_2572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2572 
Symbol 
ID3368089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2986599 
End bp2987060 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content60% 
IMG OID637652920 
Productribose/galactose isomerase 
Protein accessionYP_235649 
Protein GI66045808 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAC CTTTCCCGGT GGCTATCGGA TGTGATGAAG CGGGTTATGA ACTCAAGGAA 
TTATTGAAGC GCCATATCGA GTCGCTGGGT TATCCGGTGA CCGATTTCGG TACTCATTCC
GCGGCACCGG TGCTTTACCC GGACATCGCC CTGGCCGTGG CCACAGCGAT CAACGCCGGA
CAGCAGCGGC TTGGCGTGCT GGTCTGCGGG ACCGGAATAG GCATGGCCAT CTCCGCCAAC
AAGGTCTTCG GCATTCGTGC GGCCCAGGCC CACGATACCT ATTCGGCCGA GCGGGCACGC
AAGAGCAACG ATGCGCAAAT TCTTTCCATC GGTGCACGGG TGATCGGCAC GGAACTGGCG
AAAAGCATCG TCAAATCGTT CCTGGAGTCG GAGTTCGAAG CCGCGCGCTC CGGCGCCAAG
GTCGAGCGCA TCAACGCGAT AGAGCGTGAC GGGCATCAAT AG
 
Protein sequence
MNTPFPVAIG CDEAGYELKE LLKRHIESLG YPVTDFGTHS AAPVLYPDIA LAVATAINAG 
QQRLGVLVCG TGIGMAISAN KVFGIRAAQA HDTYSAERAR KSNDAQILSI GARVIGTELA
KSIVKSFLES EFEAARSGAK VERINAIERD GHQ