Gene Psyr_2570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2570 
Symbol 
ID3368087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2983859 
End bp2984836 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content61% 
IMG OID637652918 
Productinner-membrane translocator 
Protein accessionYP_235647 
Protein GI66045806 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAA AAACCATTAT CGCCCCAGCT TCCACGTCTC CACGCAGCCG CCTGCGCCTG 
TCTCTCGACC GTTTCGGCCT GCCGTTGGTG TTTATTCTGT TGTGCCTGGT ACTGGCTTTT
GCCAGCGAAT ATTTCATGAC CTGGCGCAAC TGGATGGACA TCCTGCGCCA GACCTCGATC
AACGGCATTC TCGCGGTCGG CATGACCTAC GTGATCCTGA CCAAGGGCAT CGACCTTTCC
GTCGGCTCGA TTCTGGCGTT CGCCGGATTG TGCAGCGCAC TGGTCGCGAC CCAGGGCTAT
GGCCTGCTGG CGGCGGTCAG CGCAGGCATG TTTGCCGGTG CCATGCTCGG CGTAGTCAAT
GGCTTCATGG TCGCCAATCT TTCGATTCCA CCGTTTGTGG CCACCTTGGG CATGCTCAGC
ATCGCCCGCG GCATGACCTT CATCCTCAAC GACGGCAGCC CGGTGACCGA CCTGCCCGAA
GAATACCTGG CGTTGGGCAT CGGCCGGATC GGCCCGATTG GTGTGCCGAT CATTATCTTC
GCGGTGGTCG CGCTGATTTT CTGGATGGTA CTGCGCTACA CCACCTACGG CCGTTACGTG
TACGCCGTCG GCGGCAACGA AAAGAGCGCG CGCACCTCCG GTATCGGTGT GCGCAAGGTG
ATGTTTTCGG TGTACGTGGT TTCCGGGCTG CTCGCCGGAC TGGCAGGCGT AGTGCTGTCC
GCCAGAACCA CCTCCGCCCT GCCCCAGGCC GGCATGTCCT ACGAACTGGA CGCCATCGCA
GCAGTGGTCA TCGGCGGCAC CAGCCTGTCG GGCGGTACTG GCAGCATCGT TGGCACACTG
TTTGGCGCAC TGCTGATCGG CGTGATCAAC AACGGCCTGA ACCTGCTCGG CGTGTCCTCC
TATTACCAGC AGGTCGCCAA GGGCCTGATC ATCGTGTTCG CAGTGTTGAT TGATGTGTGG
CGCAAGAAAA AACGCTAG
 
Protein sequence
MNAKTIIAPA STSPRSRLRL SLDRFGLPLV FILLCLVLAF ASEYFMTWRN WMDILRQTSI 
NGILAVGMTY VILTKGIDLS VGSILAFAGL CSALVATQGY GLLAAVSAGM FAGAMLGVVN
GFMVANLSIP PFVATLGMLS IARGMTFILN DGSPVTDLPE EYLALGIGRI GPIGVPIIIF
AVVALIFWMV LRYTTYGRYV YAVGGNEKSA RTSGIGVRKV MFSVYVVSGL LAGLAGVVLS
ARTTSALPQA GMSYELDAIA AVVIGGTSLS GGTGSIVGTL FGALLIGVIN NGLNLLGVSS
YYQQVAKGLI IVFAVLIDVW RKKKR