| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2564 |
|---|
| Symbol | |
|---|
| ID | 3368081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 2978136 |
|---|
| End bp | 2978876 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637652912 |
|---|
| Product | transcriptional regulator GntR |
|---|
| Protein accession | YP_235641 |
|---|
| Protein GI | 66045800 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACAG CATGCGCCAA AAAGTTGAAA GAACGCCCGG AAACTCTATC CGAGCGGATT
TACGCCCGAA TCAAAGAAGA CATTTCCGAG TTTCGTCTAT TACCCGGCGA ACGATTTACT
GAAGGTGAAA TAGCCGAGCG TGTTCAGGCC AGTCGTACAC CGGTCAGGCA GGCATTGTTC
CGGCTGGAGC AGGAAGGCTA TGTGGAGGTT TATTACCGAA GCGGCTGGCA GGTGCGGCCC
TTCGACCCTC ATCACTTCGA GGAGCTGTAT GACGTTCGGG TGGTGCTCGA GCTGGCGGCG
CTCGCCAGGC TGGGTTTGAT GGACCTGAGC GTCGAGCCGC TGATCGACGA ACTCATACGC
ACCTGGCTGG TGCCGAAAAA CGAGCGATTG AGAGACACCG ATATCCTCGC CGGGCTGGGC
GAACGCTTCC ATTGCGCGTT GGTCGAGGCG GTGGGCAACC GGGAAATGGC CAGGCTGCAT
TACGAAGTCA CCGAAAAGAC CCGGACCATC CGGCGTCTCG AATTCAGCGC CTCCAGAATC
GATGCAACGT ACGAAGAGCA TGGCAGTATT TTAAAGGCCC TCCTGCAACG TCGGCCGCGA
CAGGCTCAGC AATTGCTGGA AGCGCATGTA GAGCTCAATA AGGAGGAAGC GCGCAGAGCC
ACCCAGCATG TCTTGCGCCG CGCGCGTCAT TACGCCGAGA AGAACGGCGA GCCCGCCAGA
TTGCGTGCGC AAGTGCAGTG A
|
|---|
| Protein sequence | MQTACAKKLK ERPETLSERI YARIKEDISE FRLLPGERFT EGEIAERVQA SRTPVRQALF
RLEQEGYVEV YYRSGWQVRP FDPHHFEELY DVRVVLELAA LARLGLMDLS VEPLIDELIR
TWLVPKNERL RDTDILAGLG ERFHCALVEA VGNREMARLH YEVTEKTRTI RRLEFSASRI
DATYEEHGSI LKALLQRRPR QAQQLLEAHV ELNKEEARRA TQHVLRRARH YAEKNGEPAR
LRAQVQ
|
|---|
| |