Gene Psyr_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2562 
Symbol 
ID3368079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2975688 
End bp2977271 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content62% 
IMG OID637652910 
Producthypothetical protein 
Protein accessionYP_235639 
Protein GI66045798 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.514038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGCG CTGATCCGCT GGTCTGGCTG TTGATCGACG GGTTGTCGTG GGAGCTGGTC 
AAGCGTTACC GGGCAGGACA GCCTGGACGG CCCTCGGCGC AGTGGCCGTG TTACCCCTTG
CTGCCACTTT CACCCAATTG CCAGACGCCG CCATCACTGT TATCGATCTT CAGCGGCGCA
CCGGTCAGCG AGCACGGCTT GACGGGCTAT CTCGTCCCTG CGCCAACGCC GCAGGACTGC
CTGGCGGTGG CGGATGCCTT TGAGGTCTGG CCGCGCCACA TCGATATGGT CTGGGATGAA
TGGGCGCGCC AGGGCATCAC TTTTCGCCTG TGTGCCGTGC CCTTTGTCCA GCCCGACAGG
CTGGGTGACG CATTGCTTGG GCAAAGCTGT GTCTATCAGG GTTTTTCGCT GCGCCCTGAG
GTCATTGAAA ACGGTGGCTG GCTGCGTATC GAGGCCCTGA ATGTGCTTGC CAGGGTCAGT
CTGCAACAGG ACGGCGCTGT GCTCGACTGG CCAGAAGACC ATGGCCGTGC TGCGTGCCGG
TTGCCGCTGG GCAGCACGGT GCACGTGCCG TTGTCGGGGC AGGCCCCGGG CAATGTGTGC
AAGGCGATTG CACTGCGTGC GGTGCACATC GAAAACCGTG TTTGTGTGAT CAGCTTCGGT
TACCGTGAGG TCCAGGCGCT TGATCTGCAG GGCGACGCCG GCAAGGCTTA CGTGGCCAAT
GACCTGACGG TGCTGTATCG CACCGGACAG TTGGGCAAGC GGCTGGATGA GGGCGGGCAG
GGCGCTGCGG AATGGCTGCT GCTGGAACTG ATGCGCGAGA TGCATGAAAG CTTTTGCGAC
GACATTGTCG GCGCAGTCAG GGCCGGTGAT GCACAGCGTG TCATCGGTTA TTACCCGGTG
GTGGATCTGC TGTCACATCA TTTGCTCAAG TACCTCGCGC CAGACTGGGC CAGCGAATTG
ATGCAGGCGG TCGGACAACG CCTGTTCGAC GAGATAGCGG GGTGGGTCGA TGAGCTGATC
CTGCGCTGCG TCGATGCCGC GGGTGGCGAG ATACGCTGCG TCGCTCACTC GGATCACGGC
ATGGCACCTG TCCATCACGA TCTTTACCCC AACAGTTTTT TCGAGCAGCA GGGCTGGCTG
GTCTATGACG CATCAGGCGT GCCGGATATG CACAAAAGCG CGGCGCTCTT TCATCCGGCC
GACAACGGTC TGGTGCTGTT CAACACGGCG CGACTGGCGC TGTCCGGACA CGACCCTGGC
TCAGTGACCG AGGCCTGGCG CAAAAGCCTC GCACAGCCGT TTCGAGATGA GTGGACGATG
TTCGAGTGCG CCGGCGGGCA GGTCTTTGCC GAAGGCTGGA CGGGCGGCTG CTACTGGCAG
GCTCCGCGAG GCACGCGACT GCTGGCCACT CGTTCAGAAC ACGCCGTTCG CGTCAGCCGA
AAAGGTGGCG ACCACACGGT ATGTGCCACT GACCCGTGGT TGCGTGGCGT ATTGCTGGAC
GCCAGCAGCA CGCCCTTGTC ACGTCCTGCC GACGCTGAAG TGACATTGCC CGCGATTCGC
CATTGGCTGA CAGCCACATT CTGA
 
Protein sequence
MKGADPLVWL LIDGLSWELV KRYRAGQPGR PSAQWPCYPL LPLSPNCQTP PSLLSIFSGA 
PVSEHGLTGY LVPAPTPQDC LAVADAFEVW PRHIDMVWDE WARQGITFRL CAVPFVQPDR
LGDALLGQSC VYQGFSLRPE VIENGGWLRI EALNVLARVS LQQDGAVLDW PEDHGRAACR
LPLGSTVHVP LSGQAPGNVC KAIALRAVHI ENRVCVISFG YREVQALDLQ GDAGKAYVAN
DLTVLYRTGQ LGKRLDEGGQ GAAEWLLLEL MREMHESFCD DIVGAVRAGD AQRVIGYYPV
VDLLSHHLLK YLAPDWASEL MQAVGQRLFD EIAGWVDELI LRCVDAAGGE IRCVAHSDHG
MAPVHHDLYP NSFFEQQGWL VYDASGVPDM HKSAALFHPA DNGLVLFNTA RLALSGHDPG
SVTEAWRKSL AQPFRDEWTM FECAGGQVFA EGWTGGCYWQ APRGTRLLAT RSEHAVRVSR
KGGDHTVCAT DPWLRGVLLD ASSTPLSRPA DAEVTLPAIR HWLTATF