| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2555 |
|---|
| Symbol | |
|---|
| ID | 3368072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 2968638 |
|---|
| End bp | 2969150 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637652903 |
|---|
| Product | (dCTP deaminase), deoxycytidine triphosphate deaminase |
|---|
| Protein accession | YP_235632 |
|---|
| Protein GI | 66045791 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0717] Deoxycytidine deaminase |
|---|
| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.176925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCTCA CAGGTTCTGA AATAGTGAAG ATGCGCGAGG TCGGCAGTGT CGTCATCGAG
CCCTTCGACC CTGCACATGT CGAGGTCAAC TCATACGGCT GTCACCTGGC GGATCTGCTT
CTGGAGTACC GCAGCGACCG CATCGATCCT CACGGTGAGC TGGAGGTGGT CGAGCACCAT
ATTCCGCCCG AAGGCTTCGT GTTGTACCCC AACCGTTTTT ACCTGGGGGC GACTGCCGAG
CAGATCGGCG GTATCGATTT CGCCAGCGAG CTTTACGCCA ATGTGTCCAC GGCGTCCTGT
GGCGTTTTCA TCCAGACCAG TGCGCCGCTC GGTCATACCG GTGCGGCCAT CAGCTGGACG
CTGGAAATCG TTGTGACTCA ACCGGTGCGG GTCTATGCCG GCACCAAAGT GGCCAAGGTC
TGCTTCTGGG CGAACTTCGG CATGACCACC TGCTACGCGG GACGCTACTT GGGCTCCAAG
AGCACCGTGC CCTCGAAAAT CATTCTGGAT TGA
|
|---|
| Protein sequence | MMLTGSEIVK MREVGSVVIE PFDPAHVEVN SYGCHLADLL LEYRSDRIDP HGELEVVEHH
IPPEGFVLYP NRFYLGATAE QIGGIDFASE LYANVSTASC GVFIQTSAPL GHTGAAISWT
LEIVVTQPVR VYAGTKVAKV CFWANFGMTT CYAGRYLGSK STVPSKIILD
|
|---|
| |