Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2547 |
Symbol | |
ID | 3368064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2961449 |
End bp | 2962642 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637652895 |
Product | Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 |
Protein accession | YP_235624 |
Protein GI | 66045783 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.211268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTCAGCC ACTCGATAAA GCCGTGGCAC GAAGCTTGCT CGAAACTTGC CCGCACTTCG AAACCAGAGG CGTTCAACGT GGACACACTT TTTGCACAAT TAGCCGATGA CACCAACGAC ACCTTCTATA CCGTTGACCC GCGCTGGATC ACCCAGAATG CGCAGCAATT CAGCGGCTGT TTTCCAGGTA CCGTGCTGTA TGCAATGAAG GCCAATCCAC TCGTGCACGT GCTTGAAGCC TTGAGCCAGG GCGGTATCAA TCATTTTGAC GTGGCGTCGC TTGCCGAGGT GCAGACGGTG CACAACACGC TGCCCAACGC AGTTCAATAC CTGATGAATC CAGTGAAATC CCGCCACTGC CTGCACGAGG CCTACTATCG ACATGGCGTA CGTTCATTTG TGCTCGACAG TGAGGAGGAA CTCTCGAAGT TGCGGGACGT ACTGCCCGAG CGCGACAGCA CGATCAGCAT GTTCGTGCGC TACGCGCCCT CCGAGTCGAC GGCGGTTTAC GATCTCAGAG GCAAATTCGG GGCAAGTCCG GCGTTGGCGA CGCAACTGGT GCATCAAGTG GCGGCCAGCA CTGACTGGTC ACTCGGGCTG TCCTTCCATG TCGGTTCACA AGCCATTGAA GACGGCCCGT GGCTGGCAGC CCTCGATGAC GCGGACGCCA TCGTGCGCGA CACCGCCCAG CATGTCAGGC ACTTGGATAT CGGTGGCGGG TTTCCGGGCA ATTACCTGAA CTCCATGGGT AATACGCCGG ACCTGGTTGG CAGGGTCTGC GAGCACATTC AGACCAGCCC GACATTGAAG GATCTGAACC TGATCTGCGA AGCGGGTCGT GGCCTGGTCT ACGGCGGCAT GTCGCTGTTT GCACGGGTGC TGTCGAGACG CGAACACAGT GTTTTCTGCG GCGCCGGTAT TTTTGGCGGT TTGCTCTCCG CCCAGCAATG GCTGCAATTT CCCGCACGTG TGTGGCGAGA CGCTGCGCCT TACGCCGGCT CGGCGGAAGC CACCTTCAAT ATCTTTGGCC CCACCTGCGA CAGCATGGAT CGCCTGGCCT TCCCCTACTC GCTCGCCAGC GATATCAGGG AAGGCGACTG GCTGGAGTTT CAATCGACCG GCGCTTACTC GGTGTCCTTG CGCACCCCGT TCAACGGGTT TTACGCCGAC CGCATCATCT CTCTCCCTTC CTGA
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Protein sequence | MFSHSIKPWH EACSKLARTS KPEAFNVDTL FAQLADDTND TFYTVDPRWI TQNAQQFSGC FPGTVLYAMK ANPLVHVLEA LSQGGINHFD VASLAEVQTV HNTLPNAVQY LMNPVKSRHC LHEAYYRHGV RSFVLDSEEE LSKLRDVLPE RDSTISMFVR YAPSESTAVY DLRGKFGASP ALATQLVHQV AASTDWSLGL SFHVGSQAIE DGPWLAALDD ADAIVRDTAQ HVRHLDIGGG FPGNYLNSMG NTPDLVGRVC EHIQTSPTLK DLNLICEAGR GLVYGGMSLF ARVLSRREHS VFCGAGIFGG LLSAQQWLQF PARVWRDAAP YAGSAEATFN IFGPTCDSMD RLAFPYSLAS DIREGDWLEF QSTGAYSVSL RTPFNGFYAD RIISLPS
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