Gene Psyr_2547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2547 
Symbol 
ID3368064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2961449 
End bp2962642 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content59% 
IMG OID637652895 
ProductOrn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 
Protein accessionYP_235624 
Protein GI66045783 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.211268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCAGCC ACTCGATAAA GCCGTGGCAC GAAGCTTGCT CGAAACTTGC CCGCACTTCG 
AAACCAGAGG CGTTCAACGT GGACACACTT TTTGCACAAT TAGCCGATGA CACCAACGAC
ACCTTCTATA CCGTTGACCC GCGCTGGATC ACCCAGAATG CGCAGCAATT CAGCGGCTGT
TTTCCAGGTA CCGTGCTGTA TGCAATGAAG GCCAATCCAC TCGTGCACGT GCTTGAAGCC
TTGAGCCAGG GCGGTATCAA TCATTTTGAC GTGGCGTCGC TTGCCGAGGT GCAGACGGTG
CACAACACGC TGCCCAACGC AGTTCAATAC CTGATGAATC CAGTGAAATC CCGCCACTGC
CTGCACGAGG CCTACTATCG ACATGGCGTA CGTTCATTTG TGCTCGACAG TGAGGAGGAA
CTCTCGAAGT TGCGGGACGT ACTGCCCGAG CGCGACAGCA CGATCAGCAT GTTCGTGCGC
TACGCGCCCT CCGAGTCGAC GGCGGTTTAC GATCTCAGAG GCAAATTCGG GGCAAGTCCG
GCGTTGGCGA CGCAACTGGT GCATCAAGTG GCGGCCAGCA CTGACTGGTC ACTCGGGCTG
TCCTTCCATG TCGGTTCACA AGCCATTGAA GACGGCCCGT GGCTGGCAGC CCTCGATGAC
GCGGACGCCA TCGTGCGCGA CACCGCCCAG CATGTCAGGC ACTTGGATAT CGGTGGCGGG
TTTCCGGGCA ATTACCTGAA CTCCATGGGT AATACGCCGG ACCTGGTTGG CAGGGTCTGC
GAGCACATTC AGACCAGCCC GACATTGAAG GATCTGAACC TGATCTGCGA AGCGGGTCGT
GGCCTGGTCT ACGGCGGCAT GTCGCTGTTT GCACGGGTGC TGTCGAGACG CGAACACAGT
GTTTTCTGCG GCGCCGGTAT TTTTGGCGGT TTGCTCTCCG CCCAGCAATG GCTGCAATTT
CCCGCACGTG TGTGGCGAGA CGCTGCGCCT TACGCCGGCT CGGCGGAAGC CACCTTCAAT
ATCTTTGGCC CCACCTGCGA CAGCATGGAT CGCCTGGCCT TCCCCTACTC GCTCGCCAGC
GATATCAGGG AAGGCGACTG GCTGGAGTTT CAATCGACCG GCGCTTACTC GGTGTCCTTG
CGCACCCCGT TCAACGGGTT TTACGCCGAC CGCATCATCT CTCTCCCTTC CTGA
 
Protein sequence
MFSHSIKPWH EACSKLARTS KPEAFNVDTL FAQLADDTND TFYTVDPRWI TQNAQQFSGC 
FPGTVLYAMK ANPLVHVLEA LSQGGINHFD VASLAEVQTV HNTLPNAVQY LMNPVKSRHC
LHEAYYRHGV RSFVLDSEEE LSKLRDVLPE RDSTISMFVR YAPSESTAVY DLRGKFGASP
ALATQLVHQV AASTDWSLGL SFHVGSQAIE DGPWLAALDD ADAIVRDTAQ HVRHLDIGGG
FPGNYLNSMG NTPDLVGRVC EHIQTSPTLK DLNLICEAGR GLVYGGMSLF ARVLSRREHS
VFCGAGIFGG LLSAQQWLQF PARVWRDAAP YAGSAEATFN IFGPTCDSMD RLAFPYSLAS
DIREGDWLEF QSTGAYSVSL RTPFNGFYAD RIISLPS