Gene Psyr_2543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2543 
Symbol 
ID3368060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2959044 
End bp2959571 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content63% 
IMG OID637652891 
Producthypothetical protein 
Protein accessionYP_235620 
Protein GI66045779 
COG category[S] Function unknown 
COG ID[COG4950] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.35566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGA CCACTGAACA TTCAACGACA CCGGACGTGC TCGACAGCCT GCTGGGCATC 
GCGCCGGGCA GCCCGCTGCA CGCGGTTCGG CATGCGCGGG ACAAGGTGGC CCTGGCAACC
CAGGGCAGCC AGGACTTGTT TTTCGACCCG GCACTGGCGC ACAACCTGTC ACTGAGCGAA
CGCCTCTGGG TGGCCTACTA CGCAACGCTG CTGAGCGCGC AGCCGACCCT GAGCGGGTAT
TACCTGTCGC AGTTGCAGAC GGCCGGCGCC GAGGCAAACG TGCTGGCCGA TGTGGACGCC
AGCCGAATCG ATCTGCTGGA GGATCAGCGT CTGGCGGCGA TCCTGCGCTT TACGCGAACC
TTGATCGAGT CTCCGGTACA CGGCGATCAA AGCGCATTGC AGGCGCTGCA ACAGCAGGGC
CTGAGCACCG CTGAAATCGT GGTACTGGCG CAACTGATCG CTTTTCTGTC CTACCAGGTG
CGTCTGGCCG CAGGGCTGGG TGCTTTAAAG TCTGCCGGAG CAGCCTGA
 
Protein sequence
MTSTTEHSTT PDVLDSLLGI APGSPLHAVR HARDKVALAT QGSQDLFFDP ALAHNLSLSE 
RLWVAYYATL LSAQPTLSGY YLSQLQTAGA EANVLADVDA SRIDLLEDQR LAAILRFTRT
LIESPVHGDQ SALQALQQQG LSTAEIVVLA QLIAFLSYQV RLAAGLGALK SAGAA