Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2540 |
Symbol | |
ID | 3368057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2955341 |
End bp | 2956354 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637652888 |
Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal |
Protein accession | YP_235617 |
Protein GI | 66045776 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00259006 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGC CTGAAATGTC GTCTGTACCT GACGCAGTCC AACAGCCGAC CCTGGAGGTG CGCAACCTGT GCACTTCGTT TCATACCCGC GCCGGGGTGT TGCCAGCGGT GCGCGATGTG TCACTGCGCG TAGAGCCGGG ACGCATTCTC GGCCTGGTGG GTGAGTCCGG TTCGGGCAAG TCGGTCACCG GCTTTTCGAT CCTCGGCCTG GTCGATGAAC CCGGACGCAT CAGCGGCGGC CAGGTGCTGT TCAAGGGGCG CGATCTGACC AGGCTGTCTG CCTCACAACT GCGTGGCATT CAGGGCAACC GGGTAGCGAT GATCTTTCAG GACCCGATGA TGACCCTCAA TCCGGTGCTG CGGGTCGACA CGCAAATGAT CGAAGCCGTA CGTGCCCACA GCCCGCTGAG CAGGCGCGAG GCCCGCGAAC ACGCCAGCCG CACGCTGGCG CTGATGGGCA TCGCCAGCCC GGAAGAACGT CTGCGCGCCT ATCCGCATCA GTTGTCCGGC GGCATGCGCC AGCGGGTGGC GATCGCCATC GCGCTGCTGC ATGCACCGGA CCTGATCATC GCCGATGAGC CGACCACGGC GCTGGACGTG ACCATTCAGG CGCAGATTCT CAGTGAAGTG CAGAAGCTGG TGCGCGAGCA GGGCACTTCG CTGATCTGGA TCACCCATGA TCTTTCCGTG ATCGCCGGGC TGGCTGACGA TGTGGCGGTG ATGTACGCCG GGCGCATCGT CGAGCAGGGT CCGGTCGCCG ATGTACTGGA TCGTCCGCAG CACCCCTACA CACAAGGGCT GATCGACAGC CTGCCAAGTC GCAACCAGCG CGGCCAGCGC CTGCGGCAGA TCCCGGGCAT GGCGCCCGAC CTGCTGTCGA TGCCGGTCGG TTGTGCTTTC GCAGCGCGCT GCCCCAGAGC CTCGCAGGTC TGTGCGCAGG AGCCGCAACC CCACCAGGCG CGACCGGGCC AGACGGTTCG CTGTTTTCAC CCAGGAGCGG CCGATGCCCA GTGA
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Protein sequence | MSVPEMSSVP DAVQQPTLEV RNLCTSFHTR AGVLPAVRDV SLRVEPGRIL GLVGESGSGK SVTGFSILGL VDEPGRISGG QVLFKGRDLT RLSASQLRGI QGNRVAMIFQ DPMMTLNPVL RVDTQMIEAV RAHSPLSRRE AREHASRTLA LMGIASPEER LRAYPHQLSG GMRQRVAIAI ALLHAPDLII ADEPTTALDV TIQAQILSEV QKLVREQGTS LIWITHDLSV IAGLADDVAV MYAGRIVEQG PVADVLDRPQ HPYTQGLIDS LPSRNQRGQR LRQIPGMAPD LLSMPVGCAF AARCPRASQV CAQEPQPHQA RPGQTVRCFH PGAADAQ
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