Gene Psyr_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2540 
Symbol 
ID3368057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2955341 
End bp2956354 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content65% 
IMG OID637652888 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 
Protein accessionYP_235617 
Protein GI66045776 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00259006 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGC CTGAAATGTC GTCTGTACCT GACGCAGTCC AACAGCCGAC CCTGGAGGTG 
CGCAACCTGT GCACTTCGTT TCATACCCGC GCCGGGGTGT TGCCAGCGGT GCGCGATGTG
TCACTGCGCG TAGAGCCGGG ACGCATTCTC GGCCTGGTGG GTGAGTCCGG TTCGGGCAAG
TCGGTCACCG GCTTTTCGAT CCTCGGCCTG GTCGATGAAC CCGGACGCAT CAGCGGCGGC
CAGGTGCTGT TCAAGGGGCG CGATCTGACC AGGCTGTCTG CCTCACAACT GCGTGGCATT
CAGGGCAACC GGGTAGCGAT GATCTTTCAG GACCCGATGA TGACCCTCAA TCCGGTGCTG
CGGGTCGACA CGCAAATGAT CGAAGCCGTA CGTGCCCACA GCCCGCTGAG CAGGCGCGAG
GCCCGCGAAC ACGCCAGCCG CACGCTGGCG CTGATGGGCA TCGCCAGCCC GGAAGAACGT
CTGCGCGCCT ATCCGCATCA GTTGTCCGGC GGCATGCGCC AGCGGGTGGC GATCGCCATC
GCGCTGCTGC ATGCACCGGA CCTGATCATC GCCGATGAGC CGACCACGGC GCTGGACGTG
ACCATTCAGG CGCAGATTCT CAGTGAAGTG CAGAAGCTGG TGCGCGAGCA GGGCACTTCG
CTGATCTGGA TCACCCATGA TCTTTCCGTG ATCGCCGGGC TGGCTGACGA TGTGGCGGTG
ATGTACGCCG GGCGCATCGT CGAGCAGGGT CCGGTCGCCG ATGTACTGGA TCGTCCGCAG
CACCCCTACA CACAAGGGCT GATCGACAGC CTGCCAAGTC GCAACCAGCG CGGCCAGCGC
CTGCGGCAGA TCCCGGGCAT GGCGCCCGAC CTGCTGTCGA TGCCGGTCGG TTGTGCTTTC
GCAGCGCGCT GCCCCAGAGC CTCGCAGGTC TGTGCGCAGG AGCCGCAACC CCACCAGGCG
CGACCGGGCC AGACGGTTCG CTGTTTTCAC CCAGGAGCGG CCGATGCCCA GTGA
 
Protein sequence
MSVPEMSSVP DAVQQPTLEV RNLCTSFHTR AGVLPAVRDV SLRVEPGRIL GLVGESGSGK 
SVTGFSILGL VDEPGRISGG QVLFKGRDLT RLSASQLRGI QGNRVAMIFQ DPMMTLNPVL
RVDTQMIEAV RAHSPLSRRE AREHASRTLA LMGIASPEER LRAYPHQLSG GMRQRVAIAI
ALLHAPDLII ADEPTTALDV TIQAQILSEV QKLVREQGTS LIWITHDLSV IAGLADDVAV
MYAGRIVEQG PVADVLDRPQ HPYTQGLIDS LPSRNQRGQR LRQIPGMAPD LLSMPVGCAF
AARCPRASQV CAQEPQPHQA RPGQTVRCFH PGAADAQ