Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2536 |
Symbol | |
ID | 3368053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2950688 |
End bp | 2951677 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652884 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_235613 |
Protein GI | 66045772 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.941748 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.85232 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTCCTC ATCGGCGGTG TATCGATCAA GGCATGCTTA TGGATTTGCG TCAGCTCGAA GCCTTCGCGG CGGTCATGTC GGCAGGCAGT GTCACGGCGG CAGGGAAAAT GCTCGGCCGG TCTCAACCCT CGGTCACCCG GGCCATTCAG GAACTTGAAC AGGAGCTGGG CTTTGCGTTG TTCGAACGCA GCGGGCCTAA GGTCACGCCT ACCCACAAGG CGTTCATGAT GTATGGCGAG GTGGAGAGTG CGCTGCTGGG TGTGCGCAAC ATCCGCCAGC GTGCGCAGCA CATTGCCCAG GAGGAGAACC ACCAGATCAA GCTGGTGGCG ATCTCGGCCC TGGCGGCCGG CCTGCTGCCC ACAGCCTTGT CGCGGCTGCC CGAGCACCTG CGTCCGCAAC AGATTCAGTT GCAGAGCATG TCTCCGGAGA ACGTGGTTCA GGCCGTCCTG TCGAAAACCA TGGACCTGGG AGCGGTCAGC CTGCCGCTGG AGCATCGTGG TCTGGAAATC CACTGGATCG GCGAGGCGCC TTGTGTGGCG GTATTGCCCG CCGATTCAGC GCTGGCCGCT CATGAGGTGC TGTCGATGGA GCTGCTGCGT CAGCAGACGC TGATCACCAT GGCCAACCCG TATCGCTTTC GTCGACGCAT CGACAAGGCG TTTCAGGAGG CGGGTGGTCA GCCGCCGCGC ATGCTGGACA CCAATACGTC GCTGATTGCC ATGCAGATGG CCAGGGTCGG GCTGGGCATT GCGCTGGTCG ATCCGTTCAC GGCCATGGGC GTGCCGGTGC AAGGCGTGGT CGTCAGACCG ATCGCCTGCA ACATTCCGTT TTTCTTCGGG CTGATTTCCG CCTTCGCCAG CCCGTTGTCG GATGTGGCGC GCGCGCTGAT CGATGAAATT GCCGACAGCG CAAAAATCCT CTTGCCGGAA ATGATCATGC ACGAAGCCAG CGCGCACGAT GCCCTGTTAC AGAGCATTTA TGCCGAGTAA
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Protein sequence | MLPHRRCIDQ GMLMDLRQLE AFAAVMSAGS VTAAGKMLGR SQPSVTRAIQ ELEQELGFAL FERSGPKVTP THKAFMMYGE VESALLGVRN IRQRAQHIAQ EENHQIKLVA ISALAAGLLP TALSRLPEHL RPQQIQLQSM SPENVVQAVL SKTMDLGAVS LPLEHRGLEI HWIGEAPCVA VLPADSALAA HEVLSMELLR QQTLITMANP YRFRRRIDKA FQEAGGQPPR MLDTNTSLIA MQMARVGLGI ALVDPFTAMG VPVQGVVVRP IACNIPFFFG LISAFASPLS DVARALIDEI ADSAKILLPE MIMHEASAHD ALLQSIYAE
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