Gene Psyr_2536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2536 
Symbol 
ID3368053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2950688 
End bp2951677 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content62% 
IMG OID637652884 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_235613 
Protein GI66045772 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.941748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.85232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTCCTC ATCGGCGGTG TATCGATCAA GGCATGCTTA TGGATTTGCG TCAGCTCGAA 
GCCTTCGCGG CGGTCATGTC GGCAGGCAGT GTCACGGCGG CAGGGAAAAT GCTCGGCCGG
TCTCAACCCT CGGTCACCCG GGCCATTCAG GAACTTGAAC AGGAGCTGGG CTTTGCGTTG
TTCGAACGCA GCGGGCCTAA GGTCACGCCT ACCCACAAGG CGTTCATGAT GTATGGCGAG
GTGGAGAGTG CGCTGCTGGG TGTGCGCAAC ATCCGCCAGC GTGCGCAGCA CATTGCCCAG
GAGGAGAACC ACCAGATCAA GCTGGTGGCG ATCTCGGCCC TGGCGGCCGG CCTGCTGCCC
ACAGCCTTGT CGCGGCTGCC CGAGCACCTG CGTCCGCAAC AGATTCAGTT GCAGAGCATG
TCTCCGGAGA ACGTGGTTCA GGCCGTCCTG TCGAAAACCA TGGACCTGGG AGCGGTCAGC
CTGCCGCTGG AGCATCGTGG TCTGGAAATC CACTGGATCG GCGAGGCGCC TTGTGTGGCG
GTATTGCCCG CCGATTCAGC GCTGGCCGCT CATGAGGTGC TGTCGATGGA GCTGCTGCGT
CAGCAGACGC TGATCACCAT GGCCAACCCG TATCGCTTTC GTCGACGCAT CGACAAGGCG
TTTCAGGAGG CGGGTGGTCA GCCGCCGCGC ATGCTGGACA CCAATACGTC GCTGATTGCC
ATGCAGATGG CCAGGGTCGG GCTGGGCATT GCGCTGGTCG ATCCGTTCAC GGCCATGGGC
GTGCCGGTGC AAGGCGTGGT CGTCAGACCG ATCGCCTGCA ACATTCCGTT TTTCTTCGGG
CTGATTTCCG CCTTCGCCAG CCCGTTGTCG GATGTGGCGC GCGCGCTGAT CGATGAAATT
GCCGACAGCG CAAAAATCCT CTTGCCGGAA ATGATCATGC ACGAAGCCAG CGCGCACGAT
GCCCTGTTAC AGAGCATTTA TGCCGAGTAA
 
Protein sequence
MLPHRRCIDQ GMLMDLRQLE AFAAVMSAGS VTAAGKMLGR SQPSVTRAIQ ELEQELGFAL 
FERSGPKVTP THKAFMMYGE VESALLGVRN IRQRAQHIAQ EENHQIKLVA ISALAAGLLP
TALSRLPEHL RPQQIQLQSM SPENVVQAVL SKTMDLGAVS LPLEHRGLEI HWIGEAPCVA
VLPADSALAA HEVLSMELLR QQTLITMANP YRFRRRIDKA FQEAGGQPPR MLDTNTSLIA
MQMARVGLGI ALVDPFTAMG VPVQGVVVRP IACNIPFFFG LISAFASPLS DVARALIDEI
ADSAKILLPE MIMHEASAHD ALLQSIYAE