| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2535 |
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| Symbol | |
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| ID | 3368052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2949567 |
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| End bp | 2950619 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637652883 |
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| Product | GGDEF |
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| Protein accession | YP_235612 |
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| Protein GI | 66045771 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.388449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.835067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTTC CGACGGAAGA CCGCACCCAG CTGTTCAAGG ACACGGCTAT CCAGTTCTGG
AAACACATCA CCCCGATCGT TTATGTCGCT CTGGGCATTC ACTGTGTGTT GCTGACAGTG
TTTCTGGGCC TGGGCATGAA GATCATGTGG ATGGCGAACA TCGTCAGCAC GCTGATTTAC
GTCAACTGCA TCTACCTGAT CCGCAGGGGG CGGCATCGAC AAGCCGGACA ACTGATGTGC
CTGGAGATCA TCGGCCATGC CGTGCTCGCG ACATGGCAAC TGGGCTGGGA AAGCAACTTC
AGTTTTTACA TATTTTGCGT GATTCCGGTC ATTGCCTTCA CGTTTCAACT CAACGTCATC
AGACGCATTG CCTACAGCGT GGCGATTCTG CTGTCGCTGG TGGGCTGCTT CGTTTTTCGC
CGATACACGG GGCAGGGAAC CGGTCTGAGC CAGAACGTGC TCGATGCGTT CGGTATCGTC
AACGTACTCT CTGCGACCAC TCTGTCGATT TACGCCACTG CACTGTCGGT ACGTTTCACC
TCGTCGATGC AACTGAGCCT GTTTCATATC GCCAACCGCG ACAGCCTGAC CAATCTTTAT
ACGCGCAGAC GAGTGCTGCA TCGCATACGC GAACTGGAAG CCAGGCGGCA GGGGCTGTCG
GCTTCGTTGA TCCTGCTCGA CATCGATCAT TTCAAACAGA TCAATGATAT CCACGGGCAT
GAAACCGGCG ATGTGGTTCT GCAACGGGTC GCCGAGATCA TCGGTTCAAG CGTGCGCAGC
AGCGATATGG CGGCGCGCTG GGGCGGCGAG GAGTTTCTGG TGCTCATGCC TGACACCACG
CCCGAAGACG CGCTGCGCGC GGCCGAACGT ATCTGGCAGC GTATCGCCGA AGAGGCCGGC
CTGATCAACG AGCGCATCAT TGCCGTCAGC GCTACAGTCG CGGTGGCGAC CATCGCCACG
GGCGAGGCGT TCCAGCTGGC CCTCAATCGT GCCGACACGT CGCTGTATAT GGGCAAACAG
CAGGGCCGAA ACCGGGTAAT GATCGCCGGA TGA
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| Protein sequence | MSLPTEDRTQ LFKDTAIQFW KHITPIVYVA LGIHCVLLTV FLGLGMKIMW MANIVSTLIY
VNCIYLIRRG RHRQAGQLMC LEIIGHAVLA TWQLGWESNF SFYIFCVIPV IAFTFQLNVI
RRIAYSVAIL LSLVGCFVFR RYTGQGTGLS QNVLDAFGIV NVLSATTLSI YATALSVRFT
SSMQLSLFHI ANRDSLTNLY TRRRVLHRIR ELEARRQGLS ASLILLDIDH FKQINDIHGH
ETGDVVLQRV AEIIGSSVRS SDMAARWGGE EFLVLMPDTT PEDALRAAER IWQRIAEEAG
LINERIIAVS ATVAVATIAT GEAFQLALNR ADTSLYMGKQ QGRNRVMIAG
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