Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2532 |
Symbol | |
ID | 3368049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2944037 |
End bp | 2944942 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637652880 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_235609 |
Protein GI | 66045768 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.949132 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACCC GAAGACTGAC GCCCTCCATG TCGCTGCTGC TCGCCTTCGA GGCGGCCGCC CGGCATGGCA GCTTCACCAA GGCCGCAGAC GAACTGGCCC TGACCCAGAG CGCCGTCAGC CGGCAGGTGC AGGCGCTGGA GGCACAACTG GAAGTCGAGC TGTTCAAGCG CGACGGCAGA CGCATCGAGC TGACTACCGC AGGCGCGCTG TATCAGCATG AGCTGGCTGC CGCGCTGGGC CGCATCCGCA GTGCGACCCT GCAAACCATC GCGCACAAGG CCGAAGGCGG CACGCTGCAT CTGGCCGTGC TGCCGACCTT CGGCTCGAAG TGGCTGCTGC CACGCATGAA TGACTTTTAC ACCCGGCATC CGGGCTATGT GGTGCACATC CACTCACGCA TCGTGCATGC CGACCTGACG CCCGCCGCCA GCGAAATGAA CGCGATAATC TGTGCCGGCA ACGGCAACTG GCCCGGTTAC ATCGCGCATC CGCTGGTCAG TGAAAAACTG GTGGTGATTG CCAGCCCGGC TGCCCTTGCC GGCTACAAGA CGATGACCCC GGCGCAGGTT GCCCAGCATG CGTTGCTAAG CGTGGTGTCG CGGCCCAATG CCTGGTCGGA CTGGTTCGAC AGTAATCGGC TGGACCATCA CATCATGCGC CCCGGTCCGA GCTTCGAACT GACCTCGCAC CTGATCCAGG CCGTCGCGGC CGGCATTGGT GTCGCGCTGG TCCCGCGCAT TCTGGTGCAG GACGAAATCC ACAGTGGCGA ACTGGTCACC CTGTTCGAGC CCCTGGACAG CGGACGCAAT TATTACCTGG CCTACGCCAC GCGTTTTCAG AACCTGCCAT CGCTGTGCGT GTTCAGGGAC TGGCTGCTGT CGACGCCGTT TCCCGACACT TTGTAA
|
Protein sequence | MNTRRLTPSM SLLLAFEAAA RHGSFTKAAD ELALTQSAVS RQVQALEAQL EVELFKRDGR RIELTTAGAL YQHELAAALG RIRSATLQTI AHKAEGGTLH LAVLPTFGSK WLLPRMNDFY TRHPGYVVHI HSRIVHADLT PAASEMNAII CAGNGNWPGY IAHPLVSEKL VVIASPAALA GYKTMTPAQV AQHALLSVVS RPNAWSDWFD SNRLDHHIMR PGPSFELTSH LIQAVAAGIG VALVPRILVQ DEIHSGELVT LFEPLDSGRN YYLAYATRFQ NLPSLCVFRD WLLSTPFPDT L
|
| |