Gene Psyr_2532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2532 
Symbol 
ID3368049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2944037 
End bp2944942 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content64% 
IMG OID637652880 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_235609 
Protein GI66045768 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.949132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCC GAAGACTGAC GCCCTCCATG TCGCTGCTGC TCGCCTTCGA GGCGGCCGCC 
CGGCATGGCA GCTTCACCAA GGCCGCAGAC GAACTGGCCC TGACCCAGAG CGCCGTCAGC
CGGCAGGTGC AGGCGCTGGA GGCACAACTG GAAGTCGAGC TGTTCAAGCG CGACGGCAGA
CGCATCGAGC TGACTACCGC AGGCGCGCTG TATCAGCATG AGCTGGCTGC CGCGCTGGGC
CGCATCCGCA GTGCGACCCT GCAAACCATC GCGCACAAGG CCGAAGGCGG CACGCTGCAT
CTGGCCGTGC TGCCGACCTT CGGCTCGAAG TGGCTGCTGC CACGCATGAA TGACTTTTAC
ACCCGGCATC CGGGCTATGT GGTGCACATC CACTCACGCA TCGTGCATGC CGACCTGACG
CCCGCCGCCA GCGAAATGAA CGCGATAATC TGTGCCGGCA ACGGCAACTG GCCCGGTTAC
ATCGCGCATC CGCTGGTCAG TGAAAAACTG GTGGTGATTG CCAGCCCGGC TGCCCTTGCC
GGCTACAAGA CGATGACCCC GGCGCAGGTT GCCCAGCATG CGTTGCTAAG CGTGGTGTCG
CGGCCCAATG CCTGGTCGGA CTGGTTCGAC AGTAATCGGC TGGACCATCA CATCATGCGC
CCCGGTCCGA GCTTCGAACT GACCTCGCAC CTGATCCAGG CCGTCGCGGC CGGCATTGGT
GTCGCGCTGG TCCCGCGCAT TCTGGTGCAG GACGAAATCC ACAGTGGCGA ACTGGTCACC
CTGTTCGAGC CCCTGGACAG CGGACGCAAT TATTACCTGG CCTACGCCAC GCGTTTTCAG
AACCTGCCAT CGCTGTGCGT GTTCAGGGAC TGGCTGCTGT CGACGCCGTT TCCCGACACT
TTGTAA
 
Protein sequence
MNTRRLTPSM SLLLAFEAAA RHGSFTKAAD ELALTQSAVS RQVQALEAQL EVELFKRDGR 
RIELTTAGAL YQHELAAALG RIRSATLQTI AHKAEGGTLH LAVLPTFGSK WLLPRMNDFY
TRHPGYVVHI HSRIVHADLT PAASEMNAII CAGNGNWPGY IAHPLVSEKL VVIASPAALA
GYKTMTPAQV AQHALLSVVS RPNAWSDWFD SNRLDHHIMR PGPSFELTSH LIQAVAAGIG
VALVPRILVQ DEIHSGELVT LFEPLDSGRN YYLAYATRFQ NLPSLCVFRD WLLSTPFPDT
L