Gene Psyr_2521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2521 
Symbol 
ID3368038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand+ 
Start bp2929599 
End bp2930222 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content68% 
IMG OID637652869 
Producthypothetical protein 
Protein accessionYP_235598 
Protein GI66045757 
COG category[S] Function unknown 
COG ID[COG4544] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.286499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.330128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGGCG CGGTGGTCAG CCTGGACGCC TTGCTGGATG AGCGCAGGGT CTGGAAAGGG 
CGACAGCAGA GCGCGCCACA GGTCAGCCCG CAGCCCAGTG GCCATGCGTT GCTGGACGCT 
GCCTTGCCCA CCGGCGGCTG GCCTGCTGCG GCCATGACTG AAATCCTCAT CCCGGCCAAT 
GGCAGCGGCG AACTGCGCCT GCTGTGGCCG AGCCTGGCGC GGCTTTCCGC GATCGCTGAG 
CGCATTGTGC TGGTCGCACC ACCCTATATT CCGTACCCAC AGGCGTGGCT GGCCGCCGGC 
GTCGATCTGC GCCAGTTGGT GGTGATCGAG GCGAGTAACC GCGATGCCTT GTGGGCTGCC 
GAGCAATGCC TGCGCTCCGG CAGCTGTGGC GCGGTCGTGT GCTGGCCGGG CATGGTCGAT 
GACCGTGCGT TGCGACGCTT GCAGGTGGCT GCCGAAACCG GGCAGACCCT TGCCTTTGCC 
TGTCGCCCGC AGCAGGCCGC CGCCAACCCT TCACCTGCGG CCCTGCGCAT AGCGCTCGAT 
ACCCGTCCCG CACAGTTGCG GGTACTCAAA TGCCGGGGCG GACTTGCGCC GCCTTTCCCC 
ATTCCGTTCC CGACCGACGC TTGA
 
Protein sequence
MMGAVVSLDA LLDERRVWKG RQQSAPQVSP QPSGHALLDA ALPTGGWPAA AMTEILIPAN 
GSGELRLLWP SLARLSAIAE RIVLVAPPYI PYPQAWLAAG VDLRQLVVIE ASNRDALWAA 
EQCLRSGSCG AVVCWPGMVD DRALRRLQVA AETGQTLAFA CRPQQAAANP SPAALRIALD 
TRPAQLRVLK CRGGLAPPFP IPFPTDA