| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2506 |
|---|
| Symbol | |
|---|
| ID | 3368023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 2915281 |
|---|
| End bp | 2916066 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637652854 |
|---|
| Product | ABC transporter |
|---|
| Protein accession | YP_235583 |
|---|
| Protein GI | 66045742 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0247071 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACAGA CTCATAACCC CGGCCCGGCG CTGCTCAGCA TCGAGGGCCT GCATAAATCC
TACGGCGCAG TGGAAGTGCT CAAGGGTGTC GATCTGCGCA TGCAGAAAGG CAATGTCGTG
ACCCTGATCG GTTCCAGCGG CTCGGGAAAG ACCACTTTGC TGCGCTGCGT CAACCTGCTG
GAAGAGTTTC AGGGCGGGCA TATTCGTCTT GAGGGGCAGG ACATCGGTTA CAGCAACGTA
GACGGCAAGC GCACCCGCCA TCCGGAGCGT CTGATCGCGC AACACCGGGC AATGACCGGC
ATGGCCTTCC AGCAATTCAA CCTGTTTCCG CACCTCAGCG CCTTGCAGAA CGTCACCCTG
GGCTTGCTCA AGGTCAAGAA GATGCCCAAG GATCAAGCCG TTGCGCTGGC CGAAAAGTGG
CTGGACCGGG TCGGCCTGCT GGAGCGGCGT AATCATTTCC CCGGTCAGTT GTCCGGTGGC
CAGCAACAGC GTGTGGCGAT CGCCCGCGCC ATTGCCATGA ACCCCAGCCT GATGCTGTTT
GACGAAGTCA CTTCGGCACT CGATCCGGAA CTGGTGGGCG AAGTGCTGAG CGTCATCAAG
GACCTGGCCG AGGAGGGTAT GACCATGCTG CTGGTGACGC ACGAAATGCG TTTCGCCTAC
GAAGTGTCGG ACCAGATCGT GTTCATGAAT CAGGGCCGTA TCGAAGAGCA GGGGCCACCC
AAGGTTTTGT TCGAGCAGCC GAAGTCGGCG CGCTTGAGCG AGTTTCTCAA GAACATCCGT
TTTTAA
|
|---|
| Protein sequence | MTQTHNPGPA LLSIEGLHKS YGAVEVLKGV DLRMQKGNVV TLIGSSGSGK TTLLRCVNLL
EEFQGGHIRL EGQDIGYSNV DGKRTRHPER LIAQHRAMTG MAFQQFNLFP HLSALQNVTL
GLLKVKKMPK DQAVALAEKW LDRVGLLERR NHFPGQLSGG QQQRVAIARA IAMNPSLMLF
DEVTSALDPE LVGEVLSVIK DLAEEGMTML LVTHEMRFAY EVSDQIVFMN QGRIEEQGPP
KVLFEQPKSA RLSEFLKNIR F
|
|---|
| |