| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2505 |
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| Symbol | |
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| ID | 3368022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2914622 |
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| End bp | 2915284 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637652853 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_235582 |
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| Protein GI | 66045741 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0032626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATCAAC CCCCTGGCTG GTTGCAGGAA TTGTGGAATG CGCGAGAAGT GCTCTGGTCC
GGCTTTCTGA CCAGTATCCA GTGCTCGGCG CTGGCGATTG CCGCAGGTAC GCTGATCGGC
ATGCTGGCCG GTCTGGTGCT GACCTACGGC GGTTTTTTCG CCCGCTTGCC GATTCGCCTC
TATGTGGATC TGATTCGCGG TACCCCGGTG TTCGTGCTGG TGCTGGCGGT CTTTTATATG
GTGCCGGCGC TGGGTTGGCA GATCAGCGCG TTTCAGGCCG GCGCAATAGG CTTGACGCTG
TTTTGCGGCT CTCACGTTTC GGAAATCGTG CGCGGCGCCC TGCAGGCCAT TCCCCGTGGC
CAACTGGAAG CCGGCAAGGC CATCGGTCTG CGCTTCGGTC AGTCGCTGCG CTACGTGTTG
CTGCCTCAGG CCATGCGCCA GATCCTGCCG ACCTGGGTCA ACTCCTCGAC CGAGATCGTC
AAGGCGTCAA CGCTGCTTTC GGTGATCGGT GTGGCTGAAC TGCTGCTCAG CACCCAACAG
GTGATTGCGC GCACGTTTAT GACCTTGGAG TTCTACCTGT TTGCAGGTTT CCTGTTCTTT
CTCATCAACT ACGCCATCGA GCTTCTTGGG CGGCAAATCG AAAAACGGGT GGCATTGCCA
TGA
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| Protein sequence | MYQPPGWLQE LWNAREVLWS GFLTSIQCSA LAIAAGTLIG MLAGLVLTYG GFFARLPIRL
YVDLIRGTPV FVLVLAVFYM VPALGWQISA FQAGAIGLTL FCGSHVSEIV RGALQAIPRG
QLEAGKAIGL RFGQSLRYVL LPQAMRQILP TWVNSSTEIV KASTLLSVIG VAELLLSTQQ
VIARTFMTLE FYLFAGFLFF LINYAIELLG RQIEKRVALP
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