| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2504 |
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| Symbol | |
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| ID | 3368021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2913950 |
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| End bp | 2914612 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637652852 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_235581 |
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| Protein GI | 66045740 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.12542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATTACC AATTGAATTT TGATGCCGTA TGGCGCGACT TCCCCAGTCT TCTGGCGGGG
TTGGGTCTTG GCCTGGAACT GGCCCTGATC TCGATCGCGA TCGGCTGTGT GATCGGGCTG
GCGAATGCAT TTGCGCTGCT GTCACGTTAC AAGGCGTTGC GTATCGTCGC GTCGGTCTAC
GTGACCGTGG TGCGCAACAC GCCGATTCTG GTGTTGATCC TGCTGATCTA CTTCGCGTTG
CCCGGGCTGG GCATTCGACT GGACAAGCTG GCGTCATTCA TCGTCACCTT GTCGCTGTAC
GCCGGTGCCT ATCTGACCGA AGTATTCCGT GCCGGGCTGC TGAGCATCCA CAAGGGGCAG
CGCGAAGCGG GGCTGGCGAT CGGTCTGGGC GAATGGCAGG TGCGGGCCTA TATCATCGTG
CCGGTCATGT TGCGCAATGT ATTGCCGGCA CTCTCCAACA ACTTCATTTC GCTGTTCAAG
GACACCTCGC TGGCGGCCGC CATTGCCGTG CCGGAGCTGA CCTATTACGC GCGCAAGATC
AACGTCGAAA GCTATCGGGT GATCGAAACC TGGCTGGTGA CCACAGCACT CTATGTGGTG
GCCTGCTACG TGATCGCTCT GCTTTTGCGC ACCCTCGAAC AACGTCTGGC GATTCGCCGC
TAG
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| Protein sequence | MNYQLNFDAV WRDFPSLLAG LGLGLELALI SIAIGCVIGL ANAFALLSRY KALRIVASVY
VTVVRNTPIL VLILLIYFAL PGLGIRLDKL ASFIVTLSLY AGAYLTEVFR AGLLSIHKGQ
REAGLAIGLG EWQVRAYIIV PVMLRNVLPA LSNNFISLFK DTSLAAAIAV PELTYYARKI
NVESYRVIET WLVTTALYVV ACYVIALLLR TLEQRLAIRR
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