Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2496 |
Symbol | |
ID | 3368013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2907437 |
End bp | 2908273 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637652844 |
Product | lipopolysaccharide core biosynthesis domain-containing protein |
Protein accession | YP_235573 |
Protein GI | 66045732 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.482991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAGTC AATCAATTAA TTCGACGCGC TACGTACGCA ATGCTGTTGA CGAGCACACG CCTGCACCGA CGCGTGTGCT TGATTTCAGC CAATGCAAAG GCATTAAGAA AGGGCCGGTC TTCCTGATTG GCTCTGGGAA ATCAGCAAAG GATTTCCCGA TCCAAGAGTT CTCGCACATC CCCATGATTA CCATGAACGG CGCGTTCTCG ATGTTCGCAG GCACGAGCAT AAAACCGTTG TTCTACGTCT GCTCCGACAG GGATTTCCCC AACCAGCAGC CTGAGCTGTT CGCCGCTGCC ATGCGCTCCA GCGAGAATGT AGGCCTCTGG GAAGATCAAT TTCGCGGCGA CATTCCCAGA CCTTCCGGAT GCGCTTATGC ACTGAAGAAA TCGCCCAGAT TGTCGACGGT GGCGGCACTG TGCTCGCGAG AGGACGCACT GGTCAGAAAA CTCTCGTTAT GGAGTAGCAG AAGCCGGGAT ATCGGTTTCA GCAAGGACCT GGAACTTGGT TTTTTCGACG CCCGAACTGT CATGTATCTG GCGCTGCAAC TGTCTTATCA CCTTGGTTTC GACAACGTCT TTCTGGTCGG CTTCGATATG AATCAGTCCG TAGGCCGATT CTATGAATCA CCCAGCGACA ATTGCTCACC CTGTGGTCTG GACCAGCATT ACGAATCAAG AATTCTTCCT TCGCTGGAAC TGATGTCGAA ACAGGTCGTC GGGAGCGACT TCCAGGTATT CAATGTCTCC GAGAACTCGC GAGTGCCGCA TGAGGTGATT CCCAAGTTGA GCCTTGATGA AGTTCGCCAT AAAGTCAGCT GCGCACTTCA ACAATAG
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Protein sequence | MTSQSINSTR YVRNAVDEHT PAPTRVLDFS QCKGIKKGPV FLIGSGKSAK DFPIQEFSHI PMITMNGAFS MFAGTSIKPL FYVCSDRDFP NQQPELFAAA MRSSENVGLW EDQFRGDIPR PSGCAYALKK SPRLSTVAAL CSREDALVRK LSLWSSRSRD IGFSKDLELG FFDARTVMYL ALQLSYHLGF DNVFLVGFDM NQSVGRFYES PSDNCSPCGL DQHYESRILP SLELMSKQVV GSDFQVFNVS ENSRVPHEVI PKLSLDEVRH KVSCALQQ
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