Gene Psyr_2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2496 
Symbol 
ID3368013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2907437 
End bp2908273 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content52% 
IMG OID637652844 
Productlipopolysaccharide core biosynthesis domain-containing protein 
Protein accessionYP_235573 
Protein GI66045732 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.482991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAGTC AATCAATTAA TTCGACGCGC TACGTACGCA ATGCTGTTGA CGAGCACACG 
CCTGCACCGA CGCGTGTGCT TGATTTCAGC CAATGCAAAG GCATTAAGAA AGGGCCGGTC
TTCCTGATTG GCTCTGGGAA ATCAGCAAAG GATTTCCCGA TCCAAGAGTT CTCGCACATC
CCCATGATTA CCATGAACGG CGCGTTCTCG ATGTTCGCAG GCACGAGCAT AAAACCGTTG
TTCTACGTCT GCTCCGACAG GGATTTCCCC AACCAGCAGC CTGAGCTGTT CGCCGCTGCC
ATGCGCTCCA GCGAGAATGT AGGCCTCTGG GAAGATCAAT TTCGCGGCGA CATTCCCAGA
CCTTCCGGAT GCGCTTATGC ACTGAAGAAA TCGCCCAGAT TGTCGACGGT GGCGGCACTG
TGCTCGCGAG AGGACGCACT GGTCAGAAAA CTCTCGTTAT GGAGTAGCAG AAGCCGGGAT
ATCGGTTTCA GCAAGGACCT GGAACTTGGT TTTTTCGACG CCCGAACTGT CATGTATCTG
GCGCTGCAAC TGTCTTATCA CCTTGGTTTC GACAACGTCT TTCTGGTCGG CTTCGATATG
AATCAGTCCG TAGGCCGATT CTATGAATCA CCCAGCGACA ATTGCTCACC CTGTGGTCTG
GACCAGCATT ACGAATCAAG AATTCTTCCT TCGCTGGAAC TGATGTCGAA ACAGGTCGTC
GGGAGCGACT TCCAGGTATT CAATGTCTCC GAGAACTCGC GAGTGCCGCA TGAGGTGATT
CCCAAGTTGA GCCTTGATGA AGTTCGCCAT AAAGTCAGCT GCGCACTTCA ACAATAG
 
Protein sequence
MTSQSINSTR YVRNAVDEHT PAPTRVLDFS QCKGIKKGPV FLIGSGKSAK DFPIQEFSHI 
PMITMNGAFS MFAGTSIKPL FYVCSDRDFP NQQPELFAAA MRSSENVGLW EDQFRGDIPR
PSGCAYALKK SPRLSTVAAL CSREDALVRK LSLWSSRSRD IGFSKDLELG FFDARTVMYL
ALQLSYHLGF DNVFLVGFDM NQSVGRFYES PSDNCSPCGL DQHYESRILP SLELMSKQVV
GSDFQVFNVS ENSRVPHEVI PKLSLDEVRH KVSCALQQ