| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2495 |
|---|
| Symbol | |
|---|
| ID | 3368012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 2905473 |
|---|
| End bp | 2907062 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637652843 |
|---|
| Product | ABC transporter |
|---|
| Protein accession | YP_235572 |
|---|
| Protein GI | 66045731 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATCTCCA CAGCTAACAT CACGATGCAG TTCGGCCCCA AACCTTTGTT CGAGAATGTC
TCGGTCAAGT TTGGCGCTGG TAACCGTTAC GGCCTGATTG GCGCGAACGG CTGCGGCAAG
TCCACGTTCA TGAAAATCCT CGGTGGCGAC CTCGAGCCTT CGGGTGGGCA GGTGATGCTG
GAGCCGAACG TGCGTCTGGG TAAACTGCGC CAGGATCAGT TCGCCTATGA AGAGTTCACG
GTGCTCGACA CCGTGATCAT GGGTCACGAA GAGCTGTGGA AGGTCAAGGC CGAGCGCGAC
CGCATCTATT CGCTGCCGGA AATGAGTGAA GACGACGGCA TGGCCGTTGC CGAGCTGGAA
ACCGAGTTTG CCGAAATGGA CGGCTACACT GCCGAATCCC GCGCCGGTGA ATTGCTGTTG
GGTCTGGGTA TCGGCATCGA ACAGCACAAC GGCCCGATGA GCGAAGTCTC GCCGGGCTGG
AAGCTGCGCG TTCTGCTGGC GCAGGCACTG TTCTCTGATC CGGAAGTGCT GCTGCTCGAC
GAACCGACCA ACCACCTGGA CATCAACACC ATTCGCTGGC TGGAAAACAT CCTGACCCAG
CGTAACAGCC TGATGATCAT CATCTCCCAC GACCGTCACT TCCTGAACAG CGTGTGCACG
CACATGGCCG ACCTGGATTA CGGCGAGTTG TGCCTGTTCC CGGGCAACTA TGACGAGTAC
ATGACCGTGG CGACCCAGTC CCGCGAGCAG CTGCTGTCCG ACAACGCCAA GAAGAAAGCC
CAGATTTCCG AACTGCAATC GTTCGTCAGC CGCTTCTCGG CCAACGCCTC GAAAGCCAAG
CAGGCCACCT CCCGAGCCAA GGCGATCGAC AAGATCCAGC TGGCCGAGGT CAAGCCATCC
AGCCGTGTCA GCCCGTTCAT TCGTTTCGAG CAGACCAAAA AGCTGCACCG TCAGGCGGTC
ATCGTCGATC GCATGGCCAA AGGCTTCGAC GGCAAGACCC TGTTCAAGGA CTTCAGCTTC
CAGGTCGAAG CCGGCGAGCG TGTGGCCATC ATCGGCCCGA ACGGCATCGG CAAGACCACC
CTGCTGCGCA CCCTGGTCAA CGAGTTGCAG GCGGATGCCG GCACGGTCAA GTGGACCGAC
GCAGCGGAAA TCGGCTATTA CGCTCAGGAC CATGCTCACG ATTTCGAGGA TGACTCCACC
CTGTTCGACT GGATGGGTCA GTGGACCCAG GGCGGCGAGC AACTGGTACG TGGCACTCTG
GGCCGCATGC TGTTCTCCAA CGACGAGATC CTCAAATCGG TGAAGGTAAT TTCCGGTGGT
GAACAGGGCC GCATGCTGTT CGGCAAGCTG ATCCTGCAAA AGCCCAACGT GCTGGTGATG
GACGAACCGA CCAACCACCT GGACATGGAA TCCATCGAGT CGCTGAACCT GGCGCTGGAA
AACTATCCAG GCACACTGAT TTTCGTCAGT CACGACCGCG AGTTCGTGTC CTCGCTGGCA
ACCCGCATCA TCGAACTCAG CCCAAGTGGC GTGGTCGATT TCAGCGGCAC CTATGACGAC
TACCTGCGTA GCCAGGGCGT TACGTTCTAA
|
|---|
| Protein sequence | MISTANITMQ FGPKPLFENV SVKFGAGNRY GLIGANGCGK STFMKILGGD LEPSGGQVML
EPNVRLGKLR QDQFAYEEFT VLDTVIMGHE ELWKVKAERD RIYSLPEMSE DDGMAVAELE
TEFAEMDGYT AESRAGELLL GLGIGIEQHN GPMSEVSPGW KLRVLLAQAL FSDPEVLLLD
EPTNHLDINT IRWLENILTQ RNSLMIIISH DRHFLNSVCT HMADLDYGEL CLFPGNYDEY
MTVATQSREQ LLSDNAKKKA QISELQSFVS RFSANASKAK QATSRAKAID KIQLAEVKPS
SRVSPFIRFE QTKKLHRQAV IVDRMAKGFD GKTLFKDFSF QVEAGERVAI IGPNGIGKTT
LLRTLVNELQ ADAGTVKWTD AAEIGYYAQD HAHDFEDDST LFDWMGQWTQ GGEQLVRGTL
GRMLFSNDEI LKSVKVISGG EQGRMLFGKL ILQKPNVLVM DEPTNHLDME SIESLNLALE
NYPGTLIFVS HDREFVSSLA TRIIELSPSG VVDFSGTYDD YLRSQGVTF
|
|---|
| |