Gene Psyr_2494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2494 
Symbol 
ID3368011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2904276 
End bp2905409 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content60% 
IMG OID637652842 
Producthypothetical protein 
Protein accessionYP_235571 
Protein GI66045730 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2706] 3-carboxymuconate cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA TTCTGTTGCT GGCCGCTGCA GTCGGTTGTT CATTCGGCCT GAGCGCCCAG 
GCAGCCACCT TCGCCTATAT CTCCAGCCCT ACCGATGGGC TCGTCTCTCA ATACCGTCTC
GATGAGCAGA GCGGGGCGCT CAGTCTGGTC GAGCAAACCA GGGCGGGTGA TCAGGTCAAT
CCGATGGCCA TCACGCCGGA TGGCAGAGCG TTATTCGCGG CGCTGCGCGC CAAGCCGTAT
CAAGTGCTGA GTTTCAGCAT CGAGCCTGGC ACCGGACACC TCAAACCGCT GAGTCAGGCA
CCGCTGGCCG AGAGTCTGGC CTACCTGTCT ACCGATCGCA GCGGACGCTT CCTGTTTGGT
GCGTCCTATG GCGCCGACTT GCTCAGCGTC CAGCCCATCG ATGCGCAGCA CCGCCCGAGC
GACAGCATTC AGACTTACAA GACCGGCATG CATGCGCATT CAGTGCGTAC CGATCCGAGC
AACCGGTTTG TGTACGCTGG CAACCTGGGC GTCGATCGTG TGCTGCAATA CCGACTGGAG
CCCAAGGACG GCAAGCTTGT CCCCATCGGC GAGGGCTATG TCGCCGTTCC CGACAATACC
GGCCCGCGCC ACCTGGCCTT TTCGTCCGAC GGCAAGTTTC TGTATGTCGT CGGCGAAATG
AGTGGCACCG TCACTGCCTT CGCGATCAAT CAGAAAACCG GTGCGTTGAA GCAGACCAGT
CAGGCAGACG GTATTCCCAA ACGCTTGAAC CTGGCGCCGG GACAGGCTCG CGATGCGCGC
AACAACGACC TCAAGGATGA TCCGACGCCG CGCATCTGGG CTGCGGATAT TCGCCTCGCG
CCGAACGGCA AATGGCTGTT CATCAGTGAG CGCACCAGCA GCAGCGTGTC GGTGTTCAAG
ATTGAGCCCG CCAGTGGCAA GGTGGCGTTC GTTGACAATT ACCCCGTTCA GGAAAAGCAG
CCGCGCAACA TCGCGGTGTC GCCCAATGGG CGCTGGTTGC TGGTGAGTGG CGAGAAAAGC
GATAAGGTGG GCAGTTACGC CATAGGCGAG AAGGGTGCCT TGCAACGTGT CAGCGAAGCA
CCCTCGGGCA AGGGTGCGCT GTGGATTGAA ATGCTCAGCC AGCCGAGCGA ATAA
 
Protein sequence
MKNILLLAAA VGCSFGLSAQ AATFAYISSP TDGLVSQYRL DEQSGALSLV EQTRAGDQVN 
PMAITPDGRA LFAALRAKPY QVLSFSIEPG TGHLKPLSQA PLAESLAYLS TDRSGRFLFG
ASYGADLLSV QPIDAQHRPS DSIQTYKTGM HAHSVRTDPS NRFVYAGNLG VDRVLQYRLE
PKDGKLVPIG EGYVAVPDNT GPRHLAFSSD GKFLYVVGEM SGTVTAFAIN QKTGALKQTS
QADGIPKRLN LAPGQARDAR NNDLKDDPTP RIWAADIRLA PNGKWLFISE RTSSSVSVFK
IEPASGKVAF VDNYPVQEKQ PRNIAVSPNG RWLLVSGEKS DKVGSYAIGE KGALQRVSEA
PSGKGALWIE MLSQPSE