| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2490 |
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| Symbol | |
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| ID | 3368007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2894342 |
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| End bp | 2897668 |
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| Gene Length | 3327 bp |
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| Protein Length | 1108 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637652838 |
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| Product | Alpha amylase, catalytic region |
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| Protein accession | YP_235567 |
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| Protein GI | 66045726 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
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| TIGRFAM ID | [TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAA AGCCCGGTGA CGCGACATTT ATCAAAGACC CGCTCTGGTA CAAGGATGCG
GTGATTTATC AGGTTCACGT GAAATCGTTC TTTGATTCCA ATAACGACGG AATCGGCGAT
TTCGCGGGCT TGATCGAAAA GCTCGACTAC ATTGCCGCGC TGGGCGTCAA CACCATCTGG
TTGTTGCCGT TTTATCCGTC GCCACGCCGG GACGATGGCT ACGACATTTC CGAATACCGG
GATGTGCACA GCGACTACGG CACCATGGCC GATGCCAAGC GTTTCATCGC CCAGGCACAC
AAGCGCGGCC TGCGAGTGAT CAGCGAGCTG GTCATCAATC ATACTTCCGA CCAGCATCCC
TGGTTCCAGA AAGCCCGCAA TGCCAAGCCC GGTTCCAAGG CGCGGGACTT CTATGTGTGG
TCGGACACCG ATCAGAAGTA CGACGGTACG CGGATCATCT TTCTCGATAC CGAGACGTCC
AACTGGACCT GGGACCCGGT TGCCGGCCAG TACTTCTGGC ACCGTTTCTA CTCGCACCAG
CCGGATCTGA ATTTCGACAA CCCGCACGTG CTGGATGCGG TTCTGGAAGT CATGCGCTTC
TGGCTGGATC TGGGCATCGA CGGTTTGCGT CTGGATGCCA TTCCGTATCT CATCGAGCGG
GACGGCACCA ACAACGAGAA CCTGCCGGAA ACTCATCAGG TGCTCAAGCG CATCCGTGCC
GAGATCGACG CGAACTATCC GGACCGCATG CTGCTGGCCG AGGCCAACCA ATGGCCGGAA
GATACCCAGC TGTATTTTGG TGACAGCAAA GGCCCGGACG GCGATGAATG CCACATGGCC
TTTCACTTTC CGTTGATGCC ACGCATGTAC ATGGCGCTGG CCCAGGAAGA TCGTTTTCCG
ATCACCGATA TTTTGCGGCA GACGCCGGAG ATCCCGGAAA ATTGCCAATG GGCGATTTTC
CTGCGCAACC ACGATGAACT GACCCTGGAA ATGGTCACCG ATCGTGAGCG TGATTACCTG
TGGAATTACT ACGCGGCCGA CCGCCGTGCA CGGATCAACC TGGGCATCCG TCGGCGCCTG
GCACCCTTGG TGGATCGCGA TCGTCGCCGG GTCGAGTTGC TGAACAGCAT GCTGTTGTCG
ATGCCCGGCA CACCGACGCT GTATTACGGC GACGAGATCG GCATGGGCGA TAACATCTAC
CTGGGCGACC GGGACGGTGT GCGCACACCG ATGCAATGGT CCATCGACCG CAACGGCGGT
TTTTCGCGCG CCGACCCGGC CAGCCTGGTG TTGCCACCGA TCATGGACCC GATGTACGGC
TTCCAGTCGG TCAACGTCGA AATCCAGGAG CGTGACCCGC ATTCGCTGCT GAACTGGAAC
CGGCGCATGC TCGCCGTGCG CAAACAGCAG AAGGCATTCG GACGTGGCAC GCTGAAAATG
CTCTCGCCGT CGAACCGCCG CATTCTGGCG TATACCCGCG AATACACAGC ACCTGACGGA
CACAGTGAAG TGGTGCTGTG TGTCGCCAAC GTTTCCAGCG CCGCTCAGGC TGCAGAGCTT
GAGTTGTCTG CCTACGCAGG CACGGTACCG GTGGAAATGC TCGGCGGCAG CGCATTCCCG
CCCATCGGCC AGTTGAGCTA CCTGCTGACG CTGCCGCCGT ACGGCTTTTA CTGGTTTTTA
CTGGCTTCGG AGAATCAAAT GCCCAGTTGG CACGTTGAAC CCGCGCAGAG CATGCCGGAC
TTCCCGACTC TGGTGCTCAA GAAGCGTCTG GAAGAGTTGC TCGAAGAGCC ACTGCGCAGC
ACCATGGAAA ACACCTCGCT GGCGGTTTAC CTGCCCAAAC GGCGCTGGTT CGCGGGCAAG
GACAAGGCGA TCGAGAAGGT CAGCATTGCC TACGCCGTGC GCTTCGGCGA AGAAGCGAAT
CCGGTGCTGC TCAGCGAAAT AGAAGTCACC GCAGGCGGGC AGACCGATCG CTATCAATTG
CCGTTCGGCT TGCTGGCCGA AGACGACATC AGCAGTGCAC TGCCGCAGCA ACTGGCGCTC
GCCCGAGTGC GTCGCAATCG CGATGTCGGG CTGATCACGG ATGCATTTAC CCTGGAAACT
TTCATCCGCG CAGTGATTCA GGGCATGCAG TCGGATACGG TCATACCCTG TGCCGACGGC
GAGTTGCGTT TCGAGCAAAG TTCGCAGCTG GCACCCCTCG GCCTGAACGC CGAGTCGGAA
GTGCGCTACC TGTCTGCCGA GCAATCGAAC AGTTCGGTGG TGGTCGGCAG CAGCCTGGTG
CTCAAGCTGA TTCGCAAAGT CAGCGCCGGG ACGCACCCCG AGCTGGAAAT GGGCGCGTTC
CTGACCCGTG CCGGCTTCAA GAACATTTCG CCGCTGCTGG GCTCTCTGGT ACGCGTCGGC
AAGGACGGTC AGCCCAACCT GCTGATGATC GCTCAGGGCT ATCTGAGCAA CCAGGGCGAT
GCGTGGGAGT GGACCCAGAA CAATCTCGAG CGTGCGGTAC GTGACGAGCT GGCACATGGT
GTTTCCGGTC AGGAACAGCA TTACAACGCG CTGCTCGAGC TCGCGGACTT CTCGCGCAGT
CTTGGCCAGC GTCTGGGTGA GATGCACCAG ATTCTCGCGT CGCCCACCGA CAATGCGGAT
TTTGCCGTCG AAGTCACCAG CAGCCAGGAC AGCAAGGCCT CCGGGGTCAG CGTCAACGCT
CAGCTCGAGC GCGCCTTGCA GCTGCTGGAA CAGCGCATCG GCGAGCTGGA CAAGGACGAT
CAGCAACTGG TCAACGATCT GCTCGCGCAG CGCAAGCAGA TCCGCCAGCG CGTCGAAGGC
CTGGCCAAGC GCTCCGCCGG TGGCCTGCGC ATTCGTGTGC ATGGCGATCT GCATCTGGGG
CAAGTACTGG TGGTCAAGGG TGATGCCTAC CTGATCGATT TCGAGGGTGA ACCGGCCCGC
GCACTTGAAG AGCGCCGTGC CAAGCACAGC CCGTTCAAGG ATGTCAGCGG TGTCCTGCGG
TCCTTTGACT ACGCTGCGGC CATGGCTGTA CGCAGTGCGC AGAGCGTCGA CACGTCTCCC
GAGGCAGCCG GCGCGCGCAA ACGTGTTGCC GATACCTACC TGGCGCAGGC GCGAGAAACC
TTTATCGAGG GTTATCGCTC GGCGACCACC GGCATTGCCC ATGCCTGGAA AGATGCAAAA
GGGGAGGACG CTGCACTCGA GCTGTTCACC CTTGAAAAAG CTGCTTATGA AGTGATCTAC
GAAGCCGAGA ACCGTCCAGC CTGGCTGGCC GTTCCCTTGC AAGGCTTGCG TGGGTTGCTG
CAACCGTCTG ATGGAGAGTC AATATGA
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| Protein sequence | MAKKPGDATF IKDPLWYKDA VIYQVHVKSF FDSNNDGIGD FAGLIEKLDY IAALGVNTIW
LLPFYPSPRR DDGYDISEYR DVHSDYGTMA DAKRFIAQAH KRGLRVISEL VINHTSDQHP
WFQKARNAKP GSKARDFYVW SDTDQKYDGT RIIFLDTETS NWTWDPVAGQ YFWHRFYSHQ
PDLNFDNPHV LDAVLEVMRF WLDLGIDGLR LDAIPYLIER DGTNNENLPE THQVLKRIRA
EIDANYPDRM LLAEANQWPE DTQLYFGDSK GPDGDECHMA FHFPLMPRMY MALAQEDRFP
ITDILRQTPE IPENCQWAIF LRNHDELTLE MVTDRERDYL WNYYAADRRA RINLGIRRRL
APLVDRDRRR VELLNSMLLS MPGTPTLYYG DEIGMGDNIY LGDRDGVRTP MQWSIDRNGG
FSRADPASLV LPPIMDPMYG FQSVNVEIQE RDPHSLLNWN RRMLAVRKQQ KAFGRGTLKM
LSPSNRRILA YTREYTAPDG HSEVVLCVAN VSSAAQAAEL ELSAYAGTVP VEMLGGSAFP
PIGQLSYLLT LPPYGFYWFL LASENQMPSW HVEPAQSMPD FPTLVLKKRL EELLEEPLRS
TMENTSLAVY LPKRRWFAGK DKAIEKVSIA YAVRFGEEAN PVLLSEIEVT AGGQTDRYQL
PFGLLAEDDI SSALPQQLAL ARVRRNRDVG LITDAFTLET FIRAVIQGMQ SDTVIPCADG
ELRFEQSSQL APLGLNAESE VRYLSAEQSN SSVVVGSSLV LKLIRKVSAG THPELEMGAF
LTRAGFKNIS PLLGSLVRVG KDGQPNLLMI AQGYLSNQGD AWEWTQNNLE RAVRDELAHG
VSGQEQHYNA LLELADFSRS LGQRLGEMHQ ILASPTDNAD FAVEVTSSQD SKASGVSVNA
QLERALQLLE QRIGELDKDD QQLVNDLLAQ RKQIRQRVEG LAKRSAGGLR IRVHGDLHLG
QVLVVKGDAY LIDFEGEPAR ALEERRAKHS PFKDVSGVLR SFDYAAAMAV RSAQSVDTSP
EAAGARKRVA DTYLAQARET FIEGYRSATT GIAHAWKDAK GEDAALELFT LEKAAYEVIY
EAENRPAWLA VPLQGLRGLL QPSDGESI
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