| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2487 |
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| Symbol | |
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| ID | 3368004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2890843 |
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| End bp | 2891589 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637652835 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_235564 |
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| Protein GI | 66045723 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0147298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.672807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAG TCCTCATTAT CACCGGTGGT TCGCGCGGGA TCGGCGCTGC TACAGCGCGT
CTGGCCGCTT CACAGGGTTA TCGGATCTGC ATCAACTACC TGTCGGATCA TGCCGCTGCC
GAAAAGACCG CAGGCCAGGT GAGGGCAATG GGCGCCAGGG CGATCACCGT GCAGGCCGAT
GTCAGCAACG AAGACGAGAT CATGCGGCTG TTTGCCAGGG TCGACTCCGA ACTCGGCCGG
GTTACCCATC TGGTCAATAA TGCGGGCACC CTGGCGCAGG CTTCCAGAGT CGAGGACATG
TCGGAATTTC GCCTGTTGAA GATGATGATG AACAACGTCG TCGGCCCGAT GCTGTGCAGC
AAACATGCCT TGTTGCGCAT GTTGCCGGCA CACGGGGGGC AAGGCGGCAG CATCGTCAAC
GTATCGTCAC TCGCGGCACG CCTGGGCTCG GCAGGCGAGT ACGTCGACTA TGCAGCATCC
AAAGGAGCGC TGGACACCTT CACCATCGGG CTCTCCAAAG AGGTCGCGGC GGAAAACGTT
CGCGTCAACG CGGTACGTCC GGGGTTCATC TTCACCGACT TTCACGCCCT GAGCGGCGAT
CCGTTCCGCG TCAGCAAGCT TGAGGGGGCA TTGCCCATGG GCCGTGGCGG TACCGCCGAG
GAAGTGGCCG AAGCGATTCT CTGGTTGCTG TCGGACAATG CGTCTTATGC CACGGGAACA
TTCATCGATG TGGCGGGAGG GCGCTAA
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| Protein sequence | MEKVLIITGG SRGIGAATAR LAASQGYRIC INYLSDHAAA EKTAGQVRAM GARAITVQAD
VSNEDEIMRL FARVDSELGR VTHLVNNAGT LAQASRVEDM SEFRLLKMMM NNVVGPMLCS
KHALLRMLPA HGGQGGSIVN VSSLAARLGS AGEYVDYAAS KGALDTFTIG LSKEVAAENV
RVNAVRPGFI FTDFHALSGD PFRVSKLEGA LPMGRGGTAE EVAEAILWLL SDNASYATGT
FIDVAGGR
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