| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2479 |
|---|
| Symbol | |
|---|
| ID | 3367996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 2874013 |
|---|
| End bp | 2877693 |
|---|
| Gene Length | 3681 bp |
|---|
| Protein Length | 1226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637652827 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_235556 |
|---|
| Protein GI | 66045715 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.502504 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATATCA CCCGCGGCGC CAAGGTCGTC GGGCTGGGAC TCGTCGCATT ACTGCTGCTG
GTGATCATCA GTGTCGCGCT GCTGCTGGGC ACCCATACGG GCAGCCAGTG GGCCTTGGCT
CGGGTGCCCG GTGTGCAGCT GGAAAACTTT CAGGGACGAC TGGGCGGCCA GTGGAGCGCC
GAACGCCTCG TGTGGCAGCA GGGCGCAGAC CGCGTCGAGG TTCAATCCGT CGATTTTGCC
TGGACGCCGG CCTGCCTGTT GAAGATGACG CTGTGCATCG ACCGTCTGCA TGCGCTGCAG
GTGCTGATGC ATTTCCCGCC GAGCGATACG CCCGCCAGCG ACGGCCCGAT CCAGTTACCG
ACGCTCAGGT TACCGCTGGC GCTGCAACTG GGTGATATAC AGCTGGGCGG TCTGCAACTG
GATGGCGTCG AACAATTGCG CGATCTCAAG CTGGCAGCGC ACTGGACCGC CGAAGGCTTG
AAGATCGACA GCGCGCACCT GCAACGTGAT GCGCTGGTGC TGGACCTCAA TGGCCTGTTG
AAACCCGAGG GCGACTGGCC ACTCAGCGTG CAAGGTCAAC TGCAACTTCC GCCACAGGAT
GGCCAACCCT GGACGCTGGC TCTGGACATC CAGGGCGACC TGCTGAAGAC GCTGCAGCTC
AAGGCGGACA GCAGCGGTTA TCTGCCGGGA TTGCTGACTG GCGAGTTGCA ACCCCTGGCC
GAACACCTTC CGGCACGCAT CAGACTGACT GCCGAACACT TCAAACCCAG CGCTGCATTG
CCTGACACCT TGCAACTGGA CCAGTTGCTG CTGACAGCCC AGGGCAATCT TGACTCTGGC
TATTTGATAG ATGGCAGTGC CAGCCTGCCC GCAGAGAAAG GCCCTGTTGC GTTGTCATTG
AAAGGAAGCG TGGATGCCAA CGGCGCAACC ATCGCCGGAC TCGATCTGGC CGCCGATGAT
CAGCAGCGTC TGGCCATCAA CGGCAAGATG AACTGGCAGA GCGGTTTTTC TGCGGATGCA
AGCATCGACT GGCTGGATTT CCCCTGGCAG CGCCTGTATC CACTGGCGTC AGAGCCTCAG
GTGGCATTGC ATGCCTTCAA GGGCGATATT TCCTATACCG ATGGCAATTA CCTCGGCAAT
TTCAACGCCA GCCTCAAGGG GCCTGCCGGT GCGTTCACAC TGGTCAGCCC GTTCAGCGGC
AATCTGCAGG AGATTCATCT GCCGCAGCTG GAACTGGTCG CCGGGCAGGG CAAGGCCAGC
GGTTTCCTGA ACCTGCAGTT CGCTGACGGT ATCGGCTGGG ATACGGCTCT GGACCTGAGT
GCGCTGGACC CTTCATTCTG GGTTGCCGAA CTGCCCGGCA CACTGGCAGG CCCGTTACGC
AGCAAAGGTC AGATGCGCAA CGAGCAGCTT GAACTCAGCG CCGACCTTGA TTTGAAAGGG
CGCCTGCGTG GTCAGCCTGC GCTGCTGCAA GCCAAGGCTG ACGGCCGTGA TCAGCAATGG
AATGTCAGCA GTCTGAACAT CCGCCTCGGG GACAACCGTA TTCAAGGAAT GGGTAGTCTG
CAGGAGCGTC TCAAGGGGCA GTTGGACCTG GATCTGCCGC GTCTGGCCCA GCTTTGGCCA
CGTTTGCAGG GGCAGGTCAA AGGCCGGCTG GACCTGGCCG GAACGCTGCA GGCACCCCAG
GGACAACTGG CCTTGCAGGG CAGCCAGCTC GCCTTGCAGG ACAATCGTCT GCAAACCCTC
ACGCTCAACG CCAGACTGGA TCAGGCGCAA CGCGCGGTCA TCAACCTGAA AGGCACCGGT
ATTCAGGCTG GCGATACCCA GTTGGGCACC TTGCTGGTGG ACGGTCAGGG CACGCTCAAG
AGCCAGCAGG TGAAGCTGGA CCTGCAAGGA CCTCTGCTCA AACTGGCCAT CGGCCTTGAC
GGTGGTCTGG ACAAGGGTGA TTGGCGAGGC CGACTGGCCA GCGGTACGGT GCAGAGCGGC
GGGCAGAACT GGCGTTTGCA GCAGCCAGCG AAGATCGAGC GTCTGGCCGA TGGCCGGCTC
AACTTCGGTG CGCATTGTTG GTTGTCCGGA GCTGCCAGCC TGTGTGGCGG TGATCAGCGG
CTGATGCCTG AACCCCATCT GCGTTATCAG CTCAAGAATT TCCCGCTGGA CAGCCTGGCG
CAATGGATGC CCAAGGATTT TGCCTGGAAG GGCGCGCTGA ATGCAGACGT GCAGCTCGAC
ATTCCGGCAG CCGGCCCCAG CGGCAAGGTC ACGATTGACG CCGGAGGCGG AACGCTGCGG
GTACGCAACA ACAATCAGTG GCTGGACTTC CCTTATCAGA CGCTGAAACT GGCCACCACA
CTGGCGCCCA AACGCATCGA CACGCGTCTG GACTTCGATG GCGGCAAGCT GGGAAGGCTG
CTGCTCAACG CGCAGATCGA CCCGCTGGCC AAGGACAAAA CCCTGGCAGG TGACTTCAAC
CTCTCGGGGC TGGATATCTC GGTGGCACGT CCTTTCGCGC CAATGGTGCA GAAACTCAAT
GGGCGTCTGA ATGGCAATGG CCGGTTGTCA GGCACGTTGC TGGCGCCGCT GGTCAACGGC
AACGTGACGC TTGAAGGGGG TGAGGTGGCG GGGGCAGAGC TGCCCATGGA ACTGCACGAC
CTCAAGGTCC AGGCGTTGAT TGCCGGAGCA AGCGTACAGC TCGATGGCGG CTGGAAAAGT
GGCAGCACCG GGCAGGGCAG CATAGGCGGT CAGGTGGCCT GGGGGCAGAG CCTGAACGTC
GATGTGAGCC TCAAGGGCTC GCGCCTGCCG ATCACTGTCG AACCCTATGC GGCGGTAGAG
GCGGCGCCTG ATCTGAAAAT CTCCATGCAG GGCGAGCGAC TGGCCATCTC CGGCAAGGTG
CTGGTGCCCA ATGGCGCGAT TACCGTACGC GAGTTGCCGC CTTCCACTGT GAAGCTCTCC
GGTGACACGG TAATCGTCGG ACAGCAGACC GAGGAAGGCG CTCCGCCGCT CGCGGTGGCG
ATGGATATCG ATGTGGACGT CGGCCAGGAA AAGCTCAGCT TCAGCGGCTT CGGGCTGACC
GCCAATCTGG TCGGGCATGT GCACATTGGC GACAATCTGG ACACCCGTGG CGAACTGAAC
CTGAACGATG GTCGGTATCG CGCCTATGGG CAGCGGCTGA CCATCCGCAA GGCGCGTCTG
CTGTTTGCCG GTCCGGTCGA CCAGCCTTAT CTGGACATCG AGGCGATTCG GCAGACCGAC
GACGTGATTG CCGGTATTCG CCTGACCGGC AGCGCCGAGC AGCCTACCAC CGAGGTGTTC
TCCGAACCTG CGATGAGCCA GGAGCAGGCG CTTTCCTATC TGGTCATGGG CAGACCGCTC
AGCACTTCCG GCGAAGACAA CAACATGGTC GCTCAGGCTG CGCTGGCATT GGGTGTGGCA
GGTAGCTCGT CGACCACTGG CAAGCTCGCC GACAATCTCG GGATCAAGGA CTTCGAACTG
GACACCTCGG GAACCGGCGA CAAGACCAAT GTGGTTGCCA GCGGCAAGAT CACCGACAAG
CTCAGCCTGC GTTATGGCGT GGGCGTGTTT GAACCGGCCA ATACCATCGC CTTGCGCTAT
CTGCTCAGCA AGCGCGTGTA CCTGGAGGCC GCGAGCGGTG TTGCCAGCTC GCTGGATATT
TTCTATAAAA GGGACTTCTA G
|
|---|
| Protein sequence | MNITRGAKVV GLGLVALLLL VIISVALLLG THTGSQWALA RVPGVQLENF QGRLGGQWSA
ERLVWQQGAD RVEVQSVDFA WTPACLLKMT LCIDRLHALQ VLMHFPPSDT PASDGPIQLP
TLRLPLALQL GDIQLGGLQL DGVEQLRDLK LAAHWTAEGL KIDSAHLQRD ALVLDLNGLL
KPEGDWPLSV QGQLQLPPQD GQPWTLALDI QGDLLKTLQL KADSSGYLPG LLTGELQPLA
EHLPARIRLT AEHFKPSAAL PDTLQLDQLL LTAQGNLDSG YLIDGSASLP AEKGPVALSL
KGSVDANGAT IAGLDLAADD QQRLAINGKM NWQSGFSADA SIDWLDFPWQ RLYPLASEPQ
VALHAFKGDI SYTDGNYLGN FNASLKGPAG AFTLVSPFSG NLQEIHLPQL ELVAGQGKAS
GFLNLQFADG IGWDTALDLS ALDPSFWVAE LPGTLAGPLR SKGQMRNEQL ELSADLDLKG
RLRGQPALLQ AKADGRDQQW NVSSLNIRLG DNRIQGMGSL QERLKGQLDL DLPRLAQLWP
RLQGQVKGRL DLAGTLQAPQ GQLALQGSQL ALQDNRLQTL TLNARLDQAQ RAVINLKGTG
IQAGDTQLGT LLVDGQGTLK SQQVKLDLQG PLLKLAIGLD GGLDKGDWRG RLASGTVQSG
GQNWRLQQPA KIERLADGRL NFGAHCWLSG AASLCGGDQR LMPEPHLRYQ LKNFPLDSLA
QWMPKDFAWK GALNADVQLD IPAAGPSGKV TIDAGGGTLR VRNNNQWLDF PYQTLKLATT
LAPKRIDTRL DFDGGKLGRL LLNAQIDPLA KDKTLAGDFN LSGLDISVAR PFAPMVQKLN
GRLNGNGRLS GTLLAPLVNG NVTLEGGEVA GAELPMELHD LKVQALIAGA SVQLDGGWKS
GSTGQGSIGG QVAWGQSLNV DVSLKGSRLP ITVEPYAAVE AAPDLKISMQ GERLAISGKV
LVPNGAITVR ELPPSTVKLS GDTVIVGQQT EEGAPPLAVA MDIDVDVGQE KLSFSGFGLT
ANLVGHVHIG DNLDTRGELN LNDGRYRAYG QRLTIRKARL LFAGPVDQPY LDIEAIRQTD
DVIAGIRLTG SAEQPTTEVF SEPAMSQEQA LSYLVMGRPL STSGEDNNMV AQAALALGVA
GSSSTTGKLA DNLGIKDFEL DTSGTGDKTN VVASGKITDK LSLRYGVGVF EPANTIALRY
LLSKRVYLEA ASGVASSLDI FYKRDF
|
|---|
| |