Gene Psyr_2476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2476 
Symbol 
ID3367993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2870547 
End bp2871359 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content58% 
IMG OID637652824 
Productexonuclease III 
Protein accessionYP_235553 
Protein GI66045712 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.1362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.165238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA TCTCGTTCAA CATCAATGGT CTGCGCGCTC GACCGCATCA GTTGGCGGCG 
CTGATCGACA AACATCAGCC TGACGTGATC GGTCTTCAGG AAACCAAGGT TTCGGACGAG
CAATTTCCCC AGGCGGAAGT CGAAGCGCTG GGCTATCACG TGCACTTCCA CGGCCAGAAA
GGCCATTACG GTGTCGCTTT GCTGTCTCGT AATGCGCCGC TGGCCCTGCA CAAGGGTTTC
GAGGGGGACG ACGAGGAATC CCAGAAGCGT TTCATCTGGG GTACTTACGC CGACAGCAAC
GGCCAGCCGG TAACCATCAT GAATGGCTAC TTTCCACAGG GCGAAAGCCG TGATCACCCA
ACCAAATTCC CCGCCAAACA GCGCTTTTAC GAGAACCTGC AAACGCTGCT CGAGGGCCAC
TTTCGCAACG ATCAGCCGCT GATCGTCATG GGCGATGTGA ATATTTCTCC GCAGGACTGC
GATATCGGCA TCGGCGCCGA CAACGCCAAA CGCTGGCTGA AAACCGGCAA GTGCAGCTTT
CTGCCTGAAG AGCGGGAGTG GATGGAGCGC CTGAAGAACT GGGGCCTGGT GGACAGCTTT
CGTCACCTGT ACCCGGAGGT CGTCGACCGC TTCAGCTGGT TCGACTATCG TAGCCGTGGC
TTTGAAGACG AGCCCAAGCG CGGCCTGCGC ATCGATCTGA TCATGACCTC TACCGGCTTG
CAGCCACGCA TCAAGGAAGC CGGTGTGGAT TACGACTTGC GCGCCATGGA AAAACCGTCC
GACCACGCAC CGATCTGGCT TGAACTCAGC TGA
 
Protein sequence
MKIISFNING LRARPHQLAA LIDKHQPDVI GLQETKVSDE QFPQAEVEAL GYHVHFHGQK 
GHYGVALLSR NAPLALHKGF EGDDEESQKR FIWGTYADSN GQPVTIMNGY FPQGESRDHP
TKFPAKQRFY ENLQTLLEGH FRNDQPLIVM GDVNISPQDC DIGIGADNAK RWLKTGKCSF
LPEEREWMER LKNWGLVDSF RHLYPEVVDR FSWFDYRSRG FEDEPKRGLR IDLIMTSTGL
QPRIKEAGVD YDLRAMEKPS DHAPIWLELS