Gene Psyr_2468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2468 
Symbol 
ID3367985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2860761 
End bp2861636 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content63% 
IMG OID637652816 
Productgamma-carboxygeranoyl-CoA hydratase 
Protein accessionYP_235545 
Protein GI66045704 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.680829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0128185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCGA CCTCATTCGC AACCATAGAG CTGATCAACG ACCCACGTGG CTTTGCCACG 
CTGTGGCTGA ATCGATCGGA CAAGAACAAC GCCTTCAACG CGCAGATGAT CCGCGAGCTG
ATTATCGCCC TGGACCAGGT ACAAGGCGAT GCCAGCCTGC GCTTTCTGCT GTTGCGTGGC
CGTGGCCGGC ATTTCAGTGC TGGTGCCGAC CTGGCGTGGA TGCAGCAGGC AGCAGACCTG
GATTACAACA CCAACCTGGA CGACGCCCGC GAACTGGCGG AGCTGATGTA CAGCCTCGCC
AGGCTGAAAA TCCCGACGCT CGCCGTGGTC CAAGGCGCAG CTTTCGGCGG TGCGCTGGGC
CTGATCAGTT GCTGTGACAT GGCCATTGCA GCGGCGGATG CGCAGTTCTG CCTGTCCGAA
GTGCGCATCG GCCTGGCGCC GGCCGTTATC AGTCCATTCG TGGTACAGGC CATCGGCGAA
CGCGCTGCGC GACGTTACAC CCTGACGGCC GAGCGTTTCG ATGGCCAGCG GGCGCAGCAG
ATCGGTCTGG TCGCCGAGTG CTACCCGGCT GCAGAACTGC AAGATCGAAC GCTGCAATGG
GTCGACAACC TGTTGCTCAA CAGCCCGCAG GCCATGCGTG TCAGCAAGGA GCTGCTGCGC
GAAGTCGGCA GCGGTGTGCT GACCCCCGCG CTGCGTCGCT ACTGCGAAAG CGCAATCGCG
CGTATCCGCA CCAGTGCCGA AGGCCAGGAA GGCCTGCGCG CGTTTTTGCA GAAACGCACA
CCTGGCTGGC AGCCCGTCAA GGATCAGCCG CCTGGCAATC CCGTTCCAGC AGCCTCGACA
GCCCGGCACG AACCTCAGAA GGACTCGCAA TCATGA
 
Protein sequence
MTSTSFATIE LINDPRGFAT LWLNRSDKNN AFNAQMIREL IIALDQVQGD ASLRFLLLRG 
RGRHFSAGAD LAWMQQAADL DYNTNLDDAR ELAELMYSLA RLKIPTLAVV QGAAFGGALG
LISCCDMAIA AADAQFCLSE VRIGLAPAVI SPFVVQAIGE RAARRYTLTA ERFDGQRAQQ
IGLVAECYPA AELQDRTLQW VDNLLLNSPQ AMRVSKELLR EVGSGVLTPA LRRYCESAIA
RIRTSAEGQE GLRAFLQKRT PGWQPVKDQP PGNPVPAAST ARHEPQKDSQ S