Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2468 |
Symbol | |
ID | 3367985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2860761 |
End bp | 2861636 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637652816 |
Product | gamma-carboxygeranoyl-CoA hydratase |
Protein accession | YP_235545 |
Protein GI | 66045704 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.680829 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0128185 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCGA CCTCATTCGC AACCATAGAG CTGATCAACG ACCCACGTGG CTTTGCCACG CTGTGGCTGA ATCGATCGGA CAAGAACAAC GCCTTCAACG CGCAGATGAT CCGCGAGCTG ATTATCGCCC TGGACCAGGT ACAAGGCGAT GCCAGCCTGC GCTTTCTGCT GTTGCGTGGC CGTGGCCGGC ATTTCAGTGC TGGTGCCGAC CTGGCGTGGA TGCAGCAGGC AGCAGACCTG GATTACAACA CCAACCTGGA CGACGCCCGC GAACTGGCGG AGCTGATGTA CAGCCTCGCC AGGCTGAAAA TCCCGACGCT CGCCGTGGTC CAAGGCGCAG CTTTCGGCGG TGCGCTGGGC CTGATCAGTT GCTGTGACAT GGCCATTGCA GCGGCGGATG CGCAGTTCTG CCTGTCCGAA GTGCGCATCG GCCTGGCGCC GGCCGTTATC AGTCCATTCG TGGTACAGGC CATCGGCGAA CGCGCTGCGC GACGTTACAC CCTGACGGCC GAGCGTTTCG ATGGCCAGCG GGCGCAGCAG ATCGGTCTGG TCGCCGAGTG CTACCCGGCT GCAGAACTGC AAGATCGAAC GCTGCAATGG GTCGACAACC TGTTGCTCAA CAGCCCGCAG GCCATGCGTG TCAGCAAGGA GCTGCTGCGC GAAGTCGGCA GCGGTGTGCT GACCCCCGCG CTGCGTCGCT ACTGCGAAAG CGCAATCGCG CGTATCCGCA CCAGTGCCGA AGGCCAGGAA GGCCTGCGCG CGTTTTTGCA GAAACGCACA CCTGGCTGGC AGCCCGTCAA GGATCAGCCG CCTGGCAATC CCGTTCCAGC AGCCTCGACA GCCCGGCACG AACCTCAGAA GGACTCGCAA TCATGA
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Protein sequence | MTSTSFATIE LINDPRGFAT LWLNRSDKNN AFNAQMIREL IIALDQVQGD ASLRFLLLRG RGRHFSAGAD LAWMQQAADL DYNTNLDDAR ELAELMYSLA RLKIPTLAVV QGAAFGGALG LISCCDMAIA AADAQFCLSE VRIGLAPAVI SPFVVQAIGE RAARRYTLTA ERFDGQRAQQ IGLVAECYPA AELQDRTLQW VDNLLLNSPQ AMRVSKELLR EVGSGVLTPA LRRYCESAIA RIRTSAEGQE GLRAFLQKRT PGWQPVKDQP PGNPVPAAST ARHEPQKDSQ S
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