| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2464 |
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| Symbol | metH |
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| ID | 3367981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2852906 |
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| End bp | 2856625 |
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| Gene Length | 3720 bp |
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| Protein Length | 1239 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637652812 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_235541 |
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| Protein GI | 66045700 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.782684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0191622 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACC GCAGCGCCCG CCATCAAGCT TTTCTCACTG CTCTGAAACA GAGGATCCTG
ATCCTCGATG GCGGCATGGG CACCATGATC CAGAGCTACA GGCTCGAAGA ACAGGATTAC
CGCGGCAAGC GTTTTGCCGA CTGGCCCAGC GATGTCAAAG GCAACAATGA CCTGTTGATC
CTGACCCGCC CTGATGTGAT CGGCGCTATT GAGAAGGCTT ATCTGGATGC TGGCGCCGAC
ATCCTCGAAA CCAACACATT CAACGCCACC CAGGTGTCCC AGGCCGACTA CGGCATGGAA
TCGATCGTTT ACGAGCTGAA CGTCGAAGGC GCGCGCCTGG CGCGCAAGGT CGCAGACGCC
AAGACACTGG AAACCCCGGA CAGGCCGCGC TTCGTGGCCG GTGTGCTGGG CCCCACCAGT
CGCACCTGCT CGCTGTCGCC GGACGTCAAT AACCCCGGCT ATCGCAATGT GACCTTTGAC
GAACTGGTCG AGAACTACAC CGAAGCGACC AAGGGGCTGA TCGAAGGCGG CGCCGACCTG
ATCCTCATCG AGACCATTTT CGACACGCTC AACGCCAAGG CGGCGATCTT TGCCGTACAG
GGTGTATTCG AAGAAGTCGG CTTTGAGCTG CCGATCATGA TTTCCGGGAC CATCACCGAC
GCATCCGGGC GCACCCTGTC CGGCCAGACC ACCGAAGCGT TCTGGAACTC GATCAGCCAT
GCAAAACCTA TCTCGGTCGG CCTGAACTGC GCACTGGGCG CCAGCGAACT GCGTCCTTAC
CTGCAAGAGC TGGCCAATAA AGCCAACACC CATGTCTCCG CGCACCCCAA CGCCGGCTTG
CCGAATGCAT TTGGCGAATA CGACGAACTG CCGAGCCAGA CGGCGAAGAT CATCGAAGAA
TTCGCCCAGA GCGGCTTCCT GAACATCGTC GGCGGCTGCT GCGGTACGAC ACCGGCGCAC
ATCAAGGCGA TCGCCGAGGC GGTTTCGGGT TACGCGCCGC GGGAAATTCC GGACATCCCC
AAGGCCTGCC GCCTGTCGGG CCTCGAACCG TTCACCATCG ATCGCCAGTC GCTGTTCGTC
AACGTCGGCG AGCGTACCAA TATCACTGGC TCCGCCCGCT TCGCCCGCCT GATCCGTGAA
GACAATTACA CCGAAGCCCT CGAAGTCGCC CTGCAGCAGG TCGAAGCCGG CGCTCAGGTG
ATCGATATCA ACATGGACGA AGGCATGCTC GACTCGAAGA AGGCCATGGT GACCTTCCTC
AACCTGATCG CAGGCGAGCC GGACATCTCC CGCGTACCGA TCATGATCGA CTCCTCGAAA
TGGGAAGTGA TCGAGGCCGG CCTCAAGTGC ATCCAGGGCA AGGGCATCGT CAACTCCATC
AGCATGAAGG AAGGCGTCGA GCAGTTCATT CATCACGCCC GCCTGTGCAA GCGCTATGGC
GCGGCGGTGG TGGTCATGGC CTTCGATGAA CAGGGTCAGG CCGACACCGA AGCGCGCAAA
AAGGAAATCT GCAAGCGCTC CTACGACATT CTGGTCGACG AAGTGGGCTT CCCGCCGGAA
GACATCATCT TCGACCCGAA CATCTTCGCC ATCGCCACCG GTATCGAAGA ACACAACAAC
TATGCCGTGG ACTTCATCAA CGCCTGCGCC TACATCCGCG ACGAGCTGCC GTATGCGCTG
ACCTCGGGTG GCGTGTCCAA CGTATCTTTC TCGTTCCGCG GCAACAACCC GGTACGCGAG
GCGATCCACT CGGTGTTCCT GCTGCATGCG ATCCGTAATG GCCTGAGCAT GGGCATCGTC
AACGCCGGGC AGCTGGAAAT CTACGACCAG ATCCCCGCCG AACTGCGCGA CTGTGTCGAA
GACGTGGTGC TCAACCGCAA CCCCGAAGGC ACCGATGCAC TGCTGGCGAT TGCCGACAAG
TTCAAGGGGG ATGGCAGCGT CAAGGAAGCC GAAACCGAAG AATGGCGCAG CTGGCCGGTC
AATCAGCGTC TGGAGCACGC GCTGGTCAAG GGTATTACCA CCCATATCGT GCAGGACACC
GAAGAGTCGC GCGTGGGGTT CGCGCGGCCT ATCGAAGTGA TCGAAGGCCC GCTGATGGCG
GGCATGAACG TGGTCGGCGA CCTGTTTGGT GCAGGCAAGA TGTTCCTGCC CCAGGTGGTC
AAGTCCGCGC GCGTGATGAA ACAGGCCGTG GCGCACCTGA TTCCGTTCAT CGAGCTGGAA
AAGGGCGACA AGCCCGAAGC CAAGGGCAAG ATCCTGATGG CGACGGTCAA GGGCGACGTG
CATGACATCG GCAAGAACAT CGTCGGCGTG GTACTGGGCT GTAACGGCTA CGACATCGTC
GATCTGGGCG TAATGGTGCC TGCCGAGAAA ATCCTGCAAG TGGCCCGCGA CGAGAAATGC
GACATCATCG GCCTCTCCGG CCTGATCACG CCGTCACTGG ACGAAATGGT GCATGTTGCC
CGGGAAATGC AGCGCCAGGA CTTCCACCTG CCGCTGATGA TCGGCGGCGC GACCACCTCC
AAGGCGCACA CGGCGGTGAA GATCGAACCC AAATACAGCA ATGATGCCGT GATCTACGTC
ACCGATGCTT CCCGAGCAGT CGGCGTCGCG ACCCAGTTAC TGTCGAAAGA GCTGAAGCCG
GCCTTCATTG AAAAGACCCG CCTGGAATAC GTCGAAGTAC GTGAACGCAC CTCGGCACGC
AGCGCGCGTA CCGAGCGCCT GAGTTACGGC GCTGCAGTGG CTAAAAAGCC GCAGTTCGAC
TGGGAAAACT ACACCCCGGC CCAACCGACG TTCACCGGCA CCCGGGTCCT GCAGGATATC
GACCTGAACG TGCTGGCCGA GTACATCGAC TGGACGCCGT TCTTCATTTC CTGGGACCTG
GCTGGCAAGT ACCCGCGCAT CCTCACCGAC GAAGTGGTCG GTGAAGCGGC CACCGCTCTG
TACGCCGACG CCACGCAGAT GCTGCGCAAG CTGATCGACG AGAAGCTGAT CAGCGCCCGC
GCGGTCTTCG GCTTCTGGCC AGCCAATCAG GTCAATGACG ACGATCTGGA AGTCTATGAC
GATGACGGCA AGCCGTTGGC GAAGCTGCAT CACCTGCGCC AGCAGACCAT CAAGCCCGAC
GGCAAGCCGA ACTTCTCGCT GGCCGACTTC GTTGCACCAA AGGACAGTGG CCTGACCGAC
TACATCGGCG GGTTCATCAC CACAGCCGGC ATCGGCGCCG AGGAAGTCGC CAAGGCTTAT
CAGGACAAAG GCGACGACTA CAACTCGATC ATGGTCAAGG CGCTTGCCGA CCGTCTCGCC
GAAGCCTGCG CCGAATGGCT GCACCAGCAG GTGCGCAAGG AATACTGGGG TTATGCGCAG
GACGAAGCGC TGGACAACGA AGCGCTGATC AAGGAGCAAT ACATGGGCAT CCGCCCGGCG
CCGGGCTACC CGGCGTGCCC CGATCACACG GAAAAGGGCA CCCTGTTCGC CCTGCTCGAT
CCGCTACCGG AAGGCAGCGC CGAGCACACG GCAGGCAAGA GCGGCGTGTT CCTGACCGAG
CACTACGCGA TGTTCCCGGC TGCAGCGGTC AGCGGCTGGT ATTTCGCCCA TCCCCAGGCG
CAGTACTTCG CCGTGGGCAA GATCGACAAG GATCAGGTCG AAAGCTACAC CGCTCGCAAG
GGTCAGGACC TGAGCGTCAC CGAACGCTGG CTGGCACCGA ACCTGGGCTA CGACGAGTAA
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| Protein sequence | MSDRSARHQA FLTALKQRIL ILDGGMGTMI QSYRLEEQDY RGKRFADWPS DVKGNNDLLI
LTRPDVIGAI EKAYLDAGAD ILETNTFNAT QVSQADYGME SIVYELNVEG ARLARKVADA
KTLETPDRPR FVAGVLGPTS RTCSLSPDVN NPGYRNVTFD ELVENYTEAT KGLIEGGADL
ILIETIFDTL NAKAAIFAVQ GVFEEVGFEL PIMISGTITD ASGRTLSGQT TEAFWNSISH
AKPISVGLNC ALGASELRPY LQELANKANT HVSAHPNAGL PNAFGEYDEL PSQTAKIIEE
FAQSGFLNIV GGCCGTTPAH IKAIAEAVSG YAPREIPDIP KACRLSGLEP FTIDRQSLFV
NVGERTNITG SARFARLIRE DNYTEALEVA LQQVEAGAQV IDINMDEGML DSKKAMVTFL
NLIAGEPDIS RVPIMIDSSK WEVIEAGLKC IQGKGIVNSI SMKEGVEQFI HHARLCKRYG
AAVVVMAFDE QGQADTEARK KEICKRSYDI LVDEVGFPPE DIIFDPNIFA IATGIEEHNN
YAVDFINACA YIRDELPYAL TSGGVSNVSF SFRGNNPVRE AIHSVFLLHA IRNGLSMGIV
NAGQLEIYDQ IPAELRDCVE DVVLNRNPEG TDALLAIADK FKGDGSVKEA ETEEWRSWPV
NQRLEHALVK GITTHIVQDT EESRVGFARP IEVIEGPLMA GMNVVGDLFG AGKMFLPQVV
KSARVMKQAV AHLIPFIELE KGDKPEAKGK ILMATVKGDV HDIGKNIVGV VLGCNGYDIV
DLGVMVPAEK ILQVARDEKC DIIGLSGLIT PSLDEMVHVA REMQRQDFHL PLMIGGATTS
KAHTAVKIEP KYSNDAVIYV TDASRAVGVA TQLLSKELKP AFIEKTRLEY VEVRERTSAR
SARTERLSYG AAVAKKPQFD WENYTPAQPT FTGTRVLQDI DLNVLAEYID WTPFFISWDL
AGKYPRILTD EVVGEAATAL YADATQMLRK LIDEKLISAR AVFGFWPANQ VNDDDLEVYD
DDGKPLAKLH HLRQQTIKPD GKPNFSLADF VAPKDSGLTD YIGGFITTAG IGAEEVAKAY
QDKGDDYNSI MVKALADRLA EACAEWLHQQ VRKEYWGYAQ DEALDNEALI KEQYMGIRPA
PGYPACPDHT EKGTLFALLD PLPEGSAEHT AGKSGVFLTE HYAMFPAAAV SGWYFAHPQA
QYFAVGKIDK DQVESYTARK GQDLSVTERW LAPNLGYDE
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