Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2462 |
Symbol | |
ID | 3367979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2849581 |
End bp | 2851239 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637652810 |
Product | nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:nitrite and sulphite reductase 4Fe-4S region |
Protein accession | YP_235539 |
Protein GI | 66045698 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.133864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0089814 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTACGTAT ACGACGATTA CGATCAGAAG ATCATCGAGG ACCGCGTCAA GCAGTTCCGG GATCAGACCC GACGCTACCT GGTCGGGGAA CTGAGCGAAG AAGAGTTTCG ACCGTTGCGC CTGCAAAACG GTCTTTATGT TCAGCGCTTC GCGCCAATGT TGCGCGTCGC CGTGCCCTAC GGTCAGCTGA CCTCGCGTCA GGCGCGGATG ATGGCGAAAA TTGCGCGCGA CTACGATAAA GGCTACGCGC ACATCAGCAC CCGCCAGAAC GTACAGTTCA ACTGGCCTGC GCTTGAAGAT GTCCCTGATA TTCTCGCTGA ACTGGCAACC GTGCAGATGC ACGCTATCCA GACCAGCGGC AACTGCCTGC GCAACGTCAC CACCGACCAG TTTGCCGGTG TGGCGGCGGA CGAACTGGTA GACCCGCGCC CATGGTGCGA GATCGTCCGT CAATGGACCA CGTTCCACCC TGAATTCGCT TACCTGCCGC GCAAGTTCAA GATCGCGATC AATGGCTCGA CCAGTGACCG CGCAGCCATC GAAGTGCATG ACATCGGCCT CGAGCCATTG CGCAACGAAG CCGGCGAGCT GGGCTTCCGC GTTCTGGTCG GTGGCGGTCT TGGCCGTACA CCGGTCGTCG GTGCCTTCAT CAACGAGTTT CTGCCGTGGC AGGACCTGCT GAGCTACCTC GACGCCATCC TGCGGGTCTA CAACCGCTAT GGCCGTCGCG ACAACAAGTA CAAGGCGCGC ATCAAGATTC TGGTCAAGGC GCTGACCCCT GAAGTGTTTG CCGCCAAGGT CGAGGCTGAA ATGGCTCACC TGCGTGGCGG TCAGACCACC CTGACCGAAG CCGAAGTGCA GCGCGTGTCC CGGCACTTCG TCGACCCGCA ATACAAGGTA CTCAGCGATC AGCACGCCGA ACTGGCGGCG CTGGATGCTC AACACCCCGG CTTCGCTCGC TGGCGTCAAC GCAATGTGCT GGCGCACAAG AAGCCTGGCT ACATTGCCGT GACCCTGTCG CTCAAGCCAA CCGGCGTCGC TCCTGGCGAT GTGACCGACA AGCAACTGGA CGCCATCGCC GACCTGGCCG ATCGCTACAG CTTCGGTCAA CTGCGCACCT CCCACGAGCA GAACATCATC CTTGCCGATG TCGAGCAGAG AGAGCTGTTC ACCCTGTGGA ACGAGCTGCG CGACAATGGT TTCGCCACGC CGAACATTGG CCTTCTGACC GACATCATCT GCTGCCCGGG CGGTGACTTC TGCTCGCTGG CCAATGCCAA GTCGATCCCG ATCGCCGAAT CCATCCAGCG TCGTTTCGAC GATCTTGACT ACCTGTTCGA TATCGGCGAG CTGGACCTTA ATATCTCCGG CTGCATGAAT GCCTGCGGCC ACCACCATGT CGGCCATATC GGCGTGCTGG GCGTGGACAA GAAAGGTGAA GAGTTCTATC AGGTCTCGCT CGGCGGCAGC GCCAGCCGTG ATGCGAGCCT GGGCAAGATT CTCGGCCCCT CCTTTGCCCA GGAGGCGATG CCGGACGTGA TCGAGAAGCT GATCGACGTC TACGTTGAAA AACGTACCGA AGACGAGCGC TTCATCGACA CCTACCAACG TATTGGCATT GACCCTTTCA AGGAGCGCGT CTATGCAGCG AATCATTAA
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Protein sequence | MYVYDDYDQK IIEDRVKQFR DQTRRYLVGE LSEEEFRPLR LQNGLYVQRF APMLRVAVPY GQLTSRQARM MAKIARDYDK GYAHISTRQN VQFNWPALED VPDILAELAT VQMHAIQTSG NCLRNVTTDQ FAGVAADELV DPRPWCEIVR QWTTFHPEFA YLPRKFKIAI NGSTSDRAAI EVHDIGLEPL RNEAGELGFR VLVGGGLGRT PVVGAFINEF LPWQDLLSYL DAILRVYNRY GRRDNKYKAR IKILVKALTP EVFAAKVEAE MAHLRGGQTT LTEAEVQRVS RHFVDPQYKV LSDQHAELAA LDAQHPGFAR WRQRNVLAHK KPGYIAVTLS LKPTGVAPGD VTDKQLDAIA DLADRYSFGQ LRTSHEQNII LADVEQRELF TLWNELRDNG FATPNIGLLT DIICCPGGDF CSLANAKSIP IAESIQRRFD DLDYLFDIGE LDLNISGCMN ACGHHHVGHI GVLGVDKKGE EFYQVSLGGS ASRDASLGKI LGPSFAQEAM PDVIEKLIDV YVEKRTEDER FIDTYQRIGI DPFKERVYAA NH
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