Gene Psyr_2462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2462 
Symbol 
ID3367979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2849581 
End bp2851239 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content60% 
IMG OID637652810 
Productnitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:nitrite and sulphite reductase 4Fe-4S region 
Protein accessionYP_235539 
Protein GI66045698 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0155] Sulfite reductase, beta subunit (hemoprotein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.133864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0089814 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTACGTAT ACGACGATTA CGATCAGAAG ATCATCGAGG ACCGCGTCAA GCAGTTCCGG 
GATCAGACCC GACGCTACCT GGTCGGGGAA CTGAGCGAAG AAGAGTTTCG ACCGTTGCGC
CTGCAAAACG GTCTTTATGT TCAGCGCTTC GCGCCAATGT TGCGCGTCGC CGTGCCCTAC
GGTCAGCTGA CCTCGCGTCA GGCGCGGATG ATGGCGAAAA TTGCGCGCGA CTACGATAAA
GGCTACGCGC ACATCAGCAC CCGCCAGAAC GTACAGTTCA ACTGGCCTGC GCTTGAAGAT
GTCCCTGATA TTCTCGCTGA ACTGGCAACC GTGCAGATGC ACGCTATCCA GACCAGCGGC
AACTGCCTGC GCAACGTCAC CACCGACCAG TTTGCCGGTG TGGCGGCGGA CGAACTGGTA
GACCCGCGCC CATGGTGCGA GATCGTCCGT CAATGGACCA CGTTCCACCC TGAATTCGCT
TACCTGCCGC GCAAGTTCAA GATCGCGATC AATGGCTCGA CCAGTGACCG CGCAGCCATC
GAAGTGCATG ACATCGGCCT CGAGCCATTG CGCAACGAAG CCGGCGAGCT GGGCTTCCGC
GTTCTGGTCG GTGGCGGTCT TGGCCGTACA CCGGTCGTCG GTGCCTTCAT CAACGAGTTT
CTGCCGTGGC AGGACCTGCT GAGCTACCTC GACGCCATCC TGCGGGTCTA CAACCGCTAT
GGCCGTCGCG ACAACAAGTA CAAGGCGCGC ATCAAGATTC TGGTCAAGGC GCTGACCCCT
GAAGTGTTTG CCGCCAAGGT CGAGGCTGAA ATGGCTCACC TGCGTGGCGG TCAGACCACC
CTGACCGAAG CCGAAGTGCA GCGCGTGTCC CGGCACTTCG TCGACCCGCA ATACAAGGTA
CTCAGCGATC AGCACGCCGA ACTGGCGGCG CTGGATGCTC AACACCCCGG CTTCGCTCGC
TGGCGTCAAC GCAATGTGCT GGCGCACAAG AAGCCTGGCT ACATTGCCGT GACCCTGTCG
CTCAAGCCAA CCGGCGTCGC TCCTGGCGAT GTGACCGACA AGCAACTGGA CGCCATCGCC
GACCTGGCCG ATCGCTACAG CTTCGGTCAA CTGCGCACCT CCCACGAGCA GAACATCATC
CTTGCCGATG TCGAGCAGAG AGAGCTGTTC ACCCTGTGGA ACGAGCTGCG CGACAATGGT
TTCGCCACGC CGAACATTGG CCTTCTGACC GACATCATCT GCTGCCCGGG CGGTGACTTC
TGCTCGCTGG CCAATGCCAA GTCGATCCCG ATCGCCGAAT CCATCCAGCG TCGTTTCGAC
GATCTTGACT ACCTGTTCGA TATCGGCGAG CTGGACCTTA ATATCTCCGG CTGCATGAAT
GCCTGCGGCC ACCACCATGT CGGCCATATC GGCGTGCTGG GCGTGGACAA GAAAGGTGAA
GAGTTCTATC AGGTCTCGCT CGGCGGCAGC GCCAGCCGTG ATGCGAGCCT GGGCAAGATT
CTCGGCCCCT CCTTTGCCCA GGAGGCGATG CCGGACGTGA TCGAGAAGCT GATCGACGTC
TACGTTGAAA AACGTACCGA AGACGAGCGC TTCATCGACA CCTACCAACG TATTGGCATT
GACCCTTTCA AGGAGCGCGT CTATGCAGCG AATCATTAA
 
Protein sequence
MYVYDDYDQK IIEDRVKQFR DQTRRYLVGE LSEEEFRPLR LQNGLYVQRF APMLRVAVPY 
GQLTSRQARM MAKIARDYDK GYAHISTRQN VQFNWPALED VPDILAELAT VQMHAIQTSG
NCLRNVTTDQ FAGVAADELV DPRPWCEIVR QWTTFHPEFA YLPRKFKIAI NGSTSDRAAI
EVHDIGLEPL RNEAGELGFR VLVGGGLGRT PVVGAFINEF LPWQDLLSYL DAILRVYNRY
GRRDNKYKAR IKILVKALTP EVFAAKVEAE MAHLRGGQTT LTEAEVQRVS RHFVDPQYKV
LSDQHAELAA LDAQHPGFAR WRQRNVLAHK KPGYIAVTLS LKPTGVAPGD VTDKQLDAIA
DLADRYSFGQ LRTSHEQNII LADVEQRELF TLWNELRDNG FATPNIGLLT DIICCPGGDF
CSLANAKSIP IAESIQRRFD DLDYLFDIGE LDLNISGCMN ACGHHHVGHI GVLGVDKKGE
EFYQVSLGGS ASRDASLGKI LGPSFAQEAM PDVIEKLIDV YVEKRTEDER FIDTYQRIGI
DPFKERVYAA NH