Gene Psyr_2461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2461 
Symbol 
ID3367978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2849103 
End bp2849597 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content59% 
IMG OID637652809 
Producthypothetical protein 
Protein accessionYP_235538 
Protein GI66045697 
COG category[S] Function unknown 
COG ID[COG3749] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0248584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00666738 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGCGAA TCATTAAGAA CAACGAAGTC ATCGATGAAA CCTGGCATCT GCTGCCCAAG 
GACACGACCT TTGACAGCCT GTCGAACTGC GACGACCTGA TCGTGCCGCT GGCGCTGTGG
CGCGAACACG CGCACGCGCT GAAGGCACGC GATGGCGGTC TGGGTGTGTG GCTGGACAGC
GATGAGGAAG CCGAGGAAAT CGGCGAGGAT GTCGACCAGT TTCAGGTCAT CGCTCTGAAT
TTTCCGGCCT TCACTGATGG CCGAAGCTTC TCGAATGCGC GCCTGTTGCG TGATCGTTAT
GGCTACAAGG GTGAATTGCG TGCCATCGGC GACGTGTTGC GCGATCAGTT GTTCTACATG
CAACGTTGTG GCTTCGACGC ATTTGCGGTG CGTGCCGACA AGGATCCGTA CGAGGCACTG
GAAGGTCTGA AGGACTTCTC GGTCACCTAC CAGGCCGCGA CCGACGAGCC GCTGCCGCTG
TTCCGACGCC GCTGA
 
Protein sequence
MQRIIKNNEV IDETWHLLPK DTTFDSLSNC DDLIVPLALW REHAHALKAR DGGLGVWLDS 
DEEAEEIGED VDQFQVIALN FPAFTDGRSF SNARLLRDRY GYKGELRAIG DVLRDQLFYM
QRCGFDAFAV RADKDPYEAL EGLKDFSVTY QAATDEPLPL FRRR