| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2457 |
|---|
| Symbol | |
|---|
| ID | 3367974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 2845346 |
|---|
| End bp | 2846413 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637652805 |
|---|
| Product | aminoglycoside phosphotransferase |
|---|
| Protein accession | YP_235534 |
|---|
| Protein GI | 66045693 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3173] Predicted aminoglycoside phosphotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00764802 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGA CTGACCAGTC CACCGAGATT CGCAGCGGCG AAGAACTGGA CGCCTCCCTG
ATCGACGCGT ACCTGAAGGC GCACGTGCCG GAGCTTCACG GCACGCCGAC GATCAGTCAG
TTTCCGGGCG GCGCATCGAA CCTGACCTAC CTGCTTCAGT ACCCTGAGCG GGAACTGGTA
CTGCGTCGTC CCCCCTTCGG ACACAAGGCG CGTTCGGCCC ATGACATGGG CCGCGAGTAC
CGCATTCTCA ATCAGCTCAA GGAAGCCTTT CCCTACTGCC CGGAGGCTTA TCTGCACTGC
ACGGACGAGT CACTGATCGG CTCCGAGTTC TACGTGATGC AGCGCGTCAA GGGGATCATT
CTGCGCTCTG ACCTGCCGCC GGAACTGGCG CTGGATGCAA CACAGACCGA ACAGCTGTGC
AAAAACTTCA TCGACAAAAT GGTAGACCTG CATCGTGTCG ATTATCAGGC CTGTGGTCTG
GGTGACCTCG GCAAGCCGCA GGGCTACGTA CAGCGGCAGA TTTCCGGTTG GTCCGAGCGC
TACGAGAAAG CGCTGACCCC GGACGCTCCG GCGTGGGAGC AGGTCAAGCG CTGGCTGGCA
GACAAAATGC CGGCCGACTC GCCGACCTCG AGCATCGTGC ATAACGACTA CCGTTTCGAC
AATGTGATCC TCGACCCGGC CAACCCGATG CACATCATCG GCGTACTGGA CTGGGAGCTG
ACCACGCTCG GCGATCCGCT CATGGACCTG GGCAACACCC TCGCCTACTG GATACAGGCC
GACGATCCAG CCCCGGTGCA ACTGATGCGC CGCCAGCCAA GCAATGCGCC GGGAATGCTG
ACCCGCCAGG CTTTTGTCGA CTATTACGCC GAGCGCGCAG GCGTGCGCAT AGACAATTTC
GATTTCTACT ACACCTATGG CCTGTTCCGT CTGGCCGGTA TCGTGCAACA GATCTACTAC
CGGTTTTTTC ACGGCCAGAC CCAGGACAAA CGCTTTGCCC AATTCATTCA CATGAACAGG
CTGCTGGAGC AAATGAGCCT GCGCGTGATC GAAAAAACCA GCCTCTGA
|
|---|
| Protein sequence | MALTDQSTEI RSGEELDASL IDAYLKAHVP ELHGTPTISQ FPGGASNLTY LLQYPERELV
LRRPPFGHKA RSAHDMGREY RILNQLKEAF PYCPEAYLHC TDESLIGSEF YVMQRVKGII
LRSDLPPELA LDATQTEQLC KNFIDKMVDL HRVDYQACGL GDLGKPQGYV QRQISGWSER
YEKALTPDAP AWEQVKRWLA DKMPADSPTS SIVHNDYRFD NVILDPANPM HIIGVLDWEL
TTLGDPLMDL GNTLAYWIQA DDPAPVQLMR RQPSNAPGML TRQAFVDYYA ERAGVRIDNF
DFYYTYGLFR LAGIVQQIYY RFFHGQTQDK RFAQFIHMNR LLEQMSLRVI EKTSL
|
|---|
| |