Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2453 |
Symbol | nudC |
ID | 3367970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2841626 |
End bp | 2842462 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652801 |
Product | NADH pyrophosphatase |
Protein accession | YP_235530 |
Protein GI | 66045689 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0512372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00875229 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGCGCC CGGAGCGTTG GACAACTGCA GTTCTGGATG TCGAGGCCCC TGGCGGTTTG GCTGTGGTTC AGGGGGATCA GGGTTTTTTG CTGGACGCCA ATGGGGTGAT GTTCCCCAGA GGCTGGTTAG CCGGGCAGGA CCTGCCGGTG CAGAGCGAGC ACGGCATCGG TTATTTCGAG GGTGAGCCTG TCTACTTGCT GGTGCTTGAG CGCTCGGTTG CCGTTGAGGG CTGCGCCTGG CAAGGCTTGC GTCAGTTCAT GCTGGAAGGC GATTTCGCTG TCTTCCAGAT GCTCGGCTAC GCCGCGCAGG TCAGCACATG GGCCAGGGAG CACCGTTTCT GCGGTGCCTG CGGTCGTGCG ACGGTGCAGA TTCGCGGAGA GCGGGCGATG TTCTGCGAAC ATGACAACCT GCGGCTGTAC CCGCGTATTT CGCCAAGCAT GATTGTGCTG GTTACCCGCG GCGATGAAAT CCTGCTGGCC CGCTCACCGC GGTTTGTCAC CGGCATGTAC AGCGCACTGG CCGGGTTCGT GGAGCCGGGT GAGTCTGCTG AAGACTGCGT ACACCGCGAG GTGATGGAAG AGGTGCAGGT GCGCATCAAG AACCTCAGGT ACCGGGGCAG CCAGTGCTGG CCGTTCCCGC ACTCGATGAT GCTCGGGTTT CATGCCGAAT ACGAAAGCGG CGAAATCGTG CCCCAGGCAG AAGAAATCGA AGACGCACGC TGGTTTCATG TCGATGACCT GCCGCCGTTA CCGGCCAATC GGTCGATTGC CCGTTACCTT ATCGAGGCGT ATCTGGCCGA GCGTTCAGGC GCCCCCGAAC CAGTGCTGCC AGGCTAG
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Protein sequence | MSRPERWTTA VLDVEAPGGL AVVQGDQGFL LDANGVMFPR GWLAGQDLPV QSEHGIGYFE GEPVYLLVLE RSVAVEGCAW QGLRQFMLEG DFAVFQMLGY AAQVSTWARE HRFCGACGRA TVQIRGERAM FCEHDNLRLY PRISPSMIVL VTRGDEILLA RSPRFVTGMY SALAGFVEPG ESAEDCVHRE VMEEVQVRIK NLRYRGSQCW PFPHSMMLGF HAEYESGEIV PQAEEIEDAR WFHVDDLPPL PANRSIARYL IEAYLAERSG APEPVLPG
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