Gene Psyr_2453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2453 
SymbolnudC 
ID3367970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2841626 
End bp2842462 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content62% 
IMG OID637652801 
ProductNADH pyrophosphatase 
Protein accessionYP_235530 
Protein GI66045689 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0512372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00875229 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGCGCC CGGAGCGTTG GACAACTGCA GTTCTGGATG TCGAGGCCCC TGGCGGTTTG 
GCTGTGGTTC AGGGGGATCA GGGTTTTTTG CTGGACGCCA ATGGGGTGAT GTTCCCCAGA
GGCTGGTTAG CCGGGCAGGA CCTGCCGGTG CAGAGCGAGC ACGGCATCGG TTATTTCGAG
GGTGAGCCTG TCTACTTGCT GGTGCTTGAG CGCTCGGTTG CCGTTGAGGG CTGCGCCTGG
CAAGGCTTGC GTCAGTTCAT GCTGGAAGGC GATTTCGCTG TCTTCCAGAT GCTCGGCTAC
GCCGCGCAGG TCAGCACATG GGCCAGGGAG CACCGTTTCT GCGGTGCCTG CGGTCGTGCG
ACGGTGCAGA TTCGCGGAGA GCGGGCGATG TTCTGCGAAC ATGACAACCT GCGGCTGTAC
CCGCGTATTT CGCCAAGCAT GATTGTGCTG GTTACCCGCG GCGATGAAAT CCTGCTGGCC
CGCTCACCGC GGTTTGTCAC CGGCATGTAC AGCGCACTGG CCGGGTTCGT GGAGCCGGGT
GAGTCTGCTG AAGACTGCGT ACACCGCGAG GTGATGGAAG AGGTGCAGGT GCGCATCAAG
AACCTCAGGT ACCGGGGCAG CCAGTGCTGG CCGTTCCCGC ACTCGATGAT GCTCGGGTTT
CATGCCGAAT ACGAAAGCGG CGAAATCGTG CCCCAGGCAG AAGAAATCGA AGACGCACGC
TGGTTTCATG TCGATGACCT GCCGCCGTTA CCGGCCAATC GGTCGATTGC CCGTTACCTT
ATCGAGGCGT ATCTGGCCGA GCGTTCAGGC GCCCCCGAAC CAGTGCTGCC AGGCTAG
 
Protein sequence
MSRPERWTTA VLDVEAPGGL AVVQGDQGFL LDANGVMFPR GWLAGQDLPV QSEHGIGYFE 
GEPVYLLVLE RSVAVEGCAW QGLRQFMLEG DFAVFQMLGY AAQVSTWARE HRFCGACGRA
TVQIRGERAM FCEHDNLRLY PRISPSMIVL VTRGDEILLA RSPRFVTGMY SALAGFVEPG
ESAEDCVHRE VMEEVQVRIK NLRYRGSQCW PFPHSMMLGF HAEYESGEIV PQAEEIEDAR
WFHVDDLPPL PANRSIARYL IEAYLAERSG APEPVLPG