| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2451 |
|---|
| Symbol | |
|---|
| ID | 3367968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 2839071 |
|---|
| End bp | 2840555 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637652799 |
|---|
| Product | KaiC |
|---|
| Protein accession | YP_235528 |
|---|
| Protein GI | 66045687 |
|---|
| COG category | [L] Replication, recombination and repair
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction
[COG0468] RecA/RadA recombinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.970563 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00417767 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGAATACGT CAAAAGCGGC AACCGGCATT GAGGGCCTGG ACGACATCCT TGCAGGGGGT
CTTTCACGCA GTCATGTGTT TCTTCTCGAG GGAGAACCCG GAACCGGCAA GACAACCGTG
GCCCTGCAAT TTCTGCAGGC CGGAGCGGCA GCGGGCGAAA TATCCCTTTA CATCACCCTG
TCCGAGACTG AAAGCGAGTT GCGCTCGGGT GCCGCCTCGC ACGGCTGGGA ACTCGACGAA
CATATCAATA TCTTCGAACT GACGCCGCCC GAAAGCCTGC TCGATGCCGA TCATCACCAG
AGTCTGCTCT ACTCCTCGGA CCTGGAGCTG GGTGAGGCGA CGCGGCAGAT ATTCGAGGTG
GTCGAGCGCG TCAAACCCAC TCGCGTGGTG ATCGACAGCC TCTCGGAAAT CCGTCTTCTG
GCGCAGAGTT CGCTGCGTTA CAGACGGCAG ATTCTGGCTA TCAAGCATTA TTTCACCCGC
TACAACGCGA CGGTGCTGCT GCTTGATGAC CTGACCACCG AGGCGCTGGA CAAGACTGTG
CACAGTGTCG CCCACGGCGT TATTCGCCTT GAGGCACTGA CACCTACTTA CGGTGCCGAG
CGCAGGCGCC TGAAAATCGT CAAGTATCGT GGCCAGAAGT ACCGCGGCGG TTTTCACGAC
TTCACCATTG CCGAGAACGG TATTCACGTC TTTCCACGCC TGGTGGCGGC GGAACACCGC
TCCAACTACT CGCGCTCCCA ATTGAGCAGC GGCATCCCGG AATTGGACAA TCTGCTGGGC
GGCGGCATCG AAGGCGGCTC CAGCACCTTG ATTCTCGGCC CGGCCGGGAC CGGGAAATCG
CTCATCTCGC TGGTTTTCGC CGTGCAGGCG GTCGCACGCG GCGAGCGTGT TGGCCTGTTC
ATATTCGATG AGGAAATGGG CCTGCTGTTT GAGCGCATGC TCAAACTGGG GATCGACCTG
CGTGCGCTGC AGGAAACCGG CAATCTGGTG ATCGAACAGA TCGACGCCGC AGAGTTGTCC
CCTGGTGAAT TTGCACACCG CGTAAGACGC GCGGTGGATA AAAAGCAGAT AAAGACCGTT
GTCATCGACA GCATCAACGG CTATCAGGCT GCGATGCCGG AAGAAAGCGC GCTGGTTCTG
CACATGCACG AGCTGCTGCT CTACCTCAAC CGCCAGGGCG CCTCGACCTT CATGACCGTT
GCGCAGCACG GACTGGTGGG CGATATGCGC TCGCCGGTGG ACATTACCTA CCTTGCCGAC
AGCGTGATTC TGTTGCGCTA CTTCGAAGCA TTGGGCCAGG TACGCCGAGC GATATCGATC
ATCAAGAAGC GTACCGGTAC TCACGAGTCC ACTATCCGCG AGTACCGCAT CAGTTCCAAC
GGATTGAAAA TCGGCGAACC ATTGCAGGCC TTTCAGGGCG TACTGCGCGG TGTGCCGTCG
TACATGGGCG ACAAGAAACC GCTGCTTGAG GATGACGACC TTTGA
|
|---|
| Protein sequence | MNTSKAATGI EGLDDILAGG LSRSHVFLLE GEPGTGKTTV ALQFLQAGAA AGEISLYITL
SETESELRSG AASHGWELDE HINIFELTPP ESLLDADHHQ SLLYSSDLEL GEATRQIFEV
VERVKPTRVV IDSLSEIRLL AQSSLRYRRQ ILAIKHYFTR YNATVLLLDD LTTEALDKTV
HSVAHGVIRL EALTPTYGAE RRRLKIVKYR GQKYRGGFHD FTIAENGIHV FPRLVAAEHR
SNYSRSQLSS GIPELDNLLG GGIEGGSSTL ILGPAGTGKS LISLVFAVQA VARGERVGLF
IFDEEMGLLF ERMLKLGIDL RALQETGNLV IEQIDAAELS PGEFAHRVRR AVDKKQIKTV
VIDSINGYQA AMPEESALVL HMHELLLYLN RQGASTFMTV AQHGLVGDMR SPVDITYLAD
SVILLRYFEA LGQVRRAISI IKKRTGTHES TIREYRISSN GLKIGEPLQA FQGVLRGVPS
YMGDKKPLLE DDDL
|
|---|
| |