| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2450 |
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| Symbol | |
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| ID | 3367967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2837044 |
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| End bp | 2839074 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637652798 |
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| Product | PAS |
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| Protein accession | YP_235527 |
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| Protein GI | 66045686 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00154072 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAGTACTC CAGGCCTGTC GTCAGAGCGC GCGATCATTC TCGCCCCACG CGGGCGGGAC
AGTCAGATCG CTCTGCGCAT TCTCGACGAA GCGGGTTACC CGGCAACGGT AGCCCGTGAT
GTGTCCGAGC TGGTCAGAGA GTTGGGTATG GGGGCCGGCC TGGCGATCAT CGCTGACGAG
GCACTGCGCA ACGCAGATAT GACCCCGTTG CTCGAACTCC TCGGTCGCCA GCCGCCCTGG
TCGGACTTGC CTATCGTCTT GCTGACCCAT CACGGCGGAC CGGATCACAC CCCGCCTGCG
CGCACGGGCA GCCTGCTGGG TAACGTGACC TTTCTCGAAC GCCCTTTCCA TCCGGTGACG
CTGGTCAGCC TGGTGATGAC GGCAGTGCGC GGTCGAAGAC GTCAGTATGA AGCCCGGGCA
CGCATGGAGG ACCTGCACGA AAGCGAAGGC CGCCTGCAGA ATGCACTGAT GGCCGGCAGG
CTGGGCTCAT GGGTACTGGA GGCGGAAGAC CTCAAGCTGA CCTGCTCGAA CATCACCAAA
AGTCACTACG GCCGCGACGA GCAGAACACG CTCGACTACG ACGACTGGCT GGCCGCCGTT
TATTTCGAAG ACCAGCCCAG AATGCAATCG GCGTTGCAGC GCAGCCTGGA CACCGGTGTC
GACCTGATCA TCGAGTACCG TAATGTCTGG CCGGACGGTT CGCTCAACTG GGTGGATGTA
CGCGCCCGCG CCACTCGCAG CAAGAACGGC ATGGTCGGCT CACTGGCGGG CGTGACGTCT
GACATCACCG AGCGCAAGCA GGCCGAGTCG CAATTGCGTC GTCTCAACGA AACACTTGAG
CAACAGGTTG AAGAGCGAAC CTCGCAGCTG CGTCACAAAG AGGAGATTCT CCGCCAGTCA
CAGAAAATGG AAGCGGTCGG CCAGTTGACC GGCGGGATTG CCCATGACTT CAACAACATG
CTGACCGGGA TCATCGGCAG TCTGGAATTG ATAAGGCGGC GGCTGGCACG TGGGCGCACT
GAGGACCTGA ACAGCCTTAT TGACCTGGGT GTGACGTCGG CAAACCGCGC TGCCGCCCTG
ACCCATCGCC TGCTGGCCTT CTCACGGCGT CAGTCGCTGG ACTCCAAGCC GGTCGAGATG
AATCATCTGG TCAATGCCAT GGACGAACTG CTGCAGCGCA GCGTCAACGA GAGCATTCAC
CTGCAGTTGC GTCTGGCACA CGATCTTTGG ACCGCAGAAG CCGACCCCAA CCAACTGGAG
AGTGCCCTGC TCAACCTGGT GCTCAACGCC CGCGACGCCA TGCCTGACGG TGGTACGCTG
GTGGTCGAGA CCTTCAATCA GCAACTGGAC AGATCCTTCA CCAATGCCCA TGAGAACCTG
TTGCCGGGTG ACTATGTCGT ACTGAGCGTC AGCGACAATG GCTGTGGCAT GCCTGAGACT
GTCATCAGCC GCGCTTTCGA CCCCTTCTTC ACCACCAAAC CCATCGGCCA GGGCACGGGC
CTGGGTCTTT CGATGATTTA CGGCTTCAGC AAACAATCGC ATGGCCACGT CCTGATCAAG
AGCGAGGTCG GCGTCGGCAC TACCGTACAA CTGTTTCTGC CGCGCTTTAG CGGGATGGCG
AACGAAACCG AGCAAAGCTT CCAGAGCAAT GCGGTTTATG CCGAGAATGG CGAGACGGTG
TTGATCGTCG AAGACGACCC CGCCGTGCGG GCACTGGTCA GTGAAGTGCT CGGCGAGCTG
GGCTACACGT TTATCGAGGC TGGCGAAGCG ACGGACGCCG TGCCGATCCT GGAATCCGGA
CGGCGCATCG ATCTATTGAT CAGCGATGTA GGCCTGCCAG GCATGAACGG CAGGCAGCTG
GCGGAAATCG CCAGGCAACT GCGACCGGAA CTCAAGGTGC TGTTCATCAC CGGTTATGCA
GAACATGCGG CGGTGCGCGG AGGTTTTCTG GACACAGGGA TGCAATTGAT CACCAAACCC
TTTGCGTTCG ATCACCTGAC TTCAAAAGTA CGGGAAATGA TTGAAGCCTG A
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| Protein sequence | MSTPGLSSER AIILAPRGRD SQIALRILDE AGYPATVARD VSELVRELGM GAGLAIIADE
ALRNADMTPL LELLGRQPPW SDLPIVLLTH HGGPDHTPPA RTGSLLGNVT FLERPFHPVT
LVSLVMTAVR GRRRQYEARA RMEDLHESEG RLQNALMAGR LGSWVLEAED LKLTCSNITK
SHYGRDEQNT LDYDDWLAAV YFEDQPRMQS ALQRSLDTGV DLIIEYRNVW PDGSLNWVDV
RARATRSKNG MVGSLAGVTS DITERKQAES QLRRLNETLE QQVEERTSQL RHKEEILRQS
QKMEAVGQLT GGIAHDFNNM LTGIIGSLEL IRRRLARGRT EDLNSLIDLG VTSANRAAAL
THRLLAFSRR QSLDSKPVEM NHLVNAMDEL LQRSVNESIH LQLRLAHDLW TAEADPNQLE
SALLNLVLNA RDAMPDGGTL VVETFNQQLD RSFTNAHENL LPGDYVVLSV SDNGCGMPET
VISRAFDPFF TTKPIGQGTG LGLSMIYGFS KQSHGHVLIK SEVGVGTTVQ LFLPRFSGMA
NETEQSFQSN AVYAENGETV LIVEDDPAVR ALVSEVLGEL GYTFIEAGEA TDAVPILESG
RRIDLLISDV GLPGMNGRQL AEIARQLRPE LKVLFITGYA EHAAVRGGFL DTGMQLITKP
FAFDHLTSKV REMIEA
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