Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2445 |
Symbol | |
ID | 3367962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2830334 |
End bp | 2833852 |
Gene Length | 3519 bp |
Protein Length | 1172 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637652793 |
Product | response regulator receiver |
Protein accession | YP_235522 |
Protein GI | 66045681 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00053345 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAATCGGA CGTCTGTTGT CGATGAACAA CGCTTTCGAA AATTGCTGGG ACGTAACGTT GGCTTGCCAC TGGGTGTCGG TGTACTGAGC GCAGTTTTCT TCATTCTGCT GATCAGTTAT CTGCTCACTG CAATACAGTG GGTCGAGCAC ACTGACCGGG TGATCAACAA CACCAACCGC TCAATGAAAC TGTCGATAGA CATGGAAACC GGCATGCGCG GTTTTCTGTT GACGGGGGAT CAGCATTTTC TCGACCCCTA CGAGGTCGCC AAGCCGCTGC TGCTCGCCGA GCTGCAGGGG CTGGAGAAAC TGGTAGACGA CAACCCCACG CAACTGGATC GGTTCAGACG TCTGTCCACA CTGCAGCAGG AGTGGAATGC GTTCGCCCAG GAGATGATTA CGTTGCGGCG CACCAACGGC GATTATCAGA CGCCGGTACT GGCCGGACGT GGCAAGCGAA TCACCGATCA GATCCGTACT GAATATGATC AGGCGGTGGA AATGGAGCAG CAACTTCGTC TGACCCGCAA TGCGGAAGTC ACGCGCAGTA CCATCCTTTC CGTAACCCTT TATCTGATAT TCGTGGTGGT CGTCAGCGCA ATTCTGGCCT ATATCGGTCG CAGGGATCTG CTGTCGCTGT CGAATACCTA CAGCGAAAAC CTCAGGCTTC AGGAAGTCAA TACCGAGCGC CTGCAGAAGG TAGCCTGGCT GCGCAATGGT CAGAGCGAGC TGGCCGAGCA GGTCCTGGGG CAACTGACGC TGAACATGCT GGGCCGCAAT ATCCTCCAGT TTCTGACCCA ATACCTGGGT GCATCGGTGG CGGCGGTCTA CATTCGCCAG GACCACGGCG GCCTCACGCG GGCTGCCTCG TATGGCTTCT CCCGTGAACA GGAGCAGCAG GATCAGACCA TTCACAGTGA TGAAGGCATT GTCGGGCAGG CCGCCCAGCA GGACCGCATC ATTACCCTGG ATGAACTGCC GGATAATTAC TTCAAGGTTG CGTCCGGCCT GGGCGAGGGC TCGCCGCGCA GCGTGGTGGT GGTGCCAACC AGCAATGACG ATCAGGTCAA CGGCGTGATC GAACTGGGTT TTCTGCGCGC CCTGACCGAG CGGGACATCG AGTTCCTTGA GCTGGTGGCG GACAACGTCG GCACGTCCAT CGAAGCCGCC CGTTATCGCC AGCGTCTGCA GGAGGTGCTG GCCGAGACCC AGCAGCTCAA CGAAGAGCTG CAGGTGCAGC AGGAAGAACT GCGCACCGCC AACGAAGAGC TGGAGGAGCA GTCGCGCATC CTCAAGGAAT CCCAGGCTCA TCTGGAGACC CAGCAGGCCG AACTTGAGCA GACCAACGAG CAGTTGGCCG ACCAGAGTCA AGCTCTGGCC GAGCAGCGCG ATGCGCTGGA TCGCAACAAC GAAGAACTGA ATATCGCCCA GGCCGAGTTG CAGGCGCGGG CGGACGAGCT GCAGCGTGCC AGCAAGTACA AGTCCGAGTT CCTCGCCAAT ATGTCCCACG AGTTGCGCAC GCCGCTCAAC AGCTCGCTGA TCCTCGCCAA GCTGCTGGCC GAGAACCCGG GCGAAAACCT CACCGCCGAA CAGGTCAAGT TTGCCGAGTC GATCTATTCG GCAGGTAATG ACCTGCTGAA TCTGATCAAC GACATTCTGG ATATTTCCAA GGTCGAAGCC GGCAAGCTGG AAATGCGTCC GGAAAACAGC AGCGTGTCCC GTCTGGTTGA AGGTCTGCGG ACACTCTTCC AGCCGCTCGC CGCCGAGAAG AAACTGGCGT TTACCGTCGA CATCCAGGCC GGTGCGCCCA CCATGCTGTT CACGGATCGC CAGCGCCTTG AGCAGATCCT CAAGAACCTG CTGTCCAACG CGATCAAGTT CACCGAGGCC GGCTCGGTCA GCATGGTCGT CTCGCGCCAG CCAGGCGCCG GTATCGCGTT CATTGTGCGT GACTCGGGCA TCGGCATCGC CGAGGAGCAT CAGCAGGGTA TTTTCGAAGC GTTCCGTCAG GCAGACGGCA CCACCAACCG ACGTTATGGC GGTACCGGCT TGGGGCTGTC GATTTCACGA GATCTGGCGG CATTACTGGG CGGATCGATC AGTGTCACCA GCGCACCGGG GCAGGGCAGT ATTTTCAGCC TGGTGCTGCC GGAGCATTAC GTCGAGCAAG ACGATCGCGA GCCGGGCAGC GATCTGCCGA TCGTGTCAGC GCCTGCTGCG CTACAGCCGT ATGCCCCTGT GCTTCCGGTC ATTGCGCAGC CCGTTCCGGC ACCCGTGCCG ATGGATACGC CGGTGCCGGT ATTTGACGAC GACCGTGACA AGGCACCTTT CCAGCGGCGC TGCATCCTGG TGATCGAAGA TGAAGTGCGA TTCGCCCAGA TTCTCTACGA CCTGGCCCAT GAGCTGGGTT ACGACTGTCT GGTGGCGCAT GCTGCCGACG ATGGCTTCAA TCTGGCATCC CGTTATACGC CGGATGCGAT CCTGCTGGAC ATGCGCCTGC CGGACCATTC GGGCCTGACC GTGCTGCAAC GTCTCAAGGA GCTGGCGCCC ACCCGGCACA TTCCCGTGCA CGTGATCTCG GTCGAAGATC GTCAGGAAGC CGCATTGCAC ATGGGCGCCA TTGGCTACGC GGTCAAGCCG ACCACACGCG AAGAGCTCAA GGACGTGTTC GCCAAGCTGG AGGCCAAGCT GACGCAGAAG GTCAAGCGTA TCCTGCTGGT CGAGGACGAC GCGCTACAGC GTGACAGCAT CGCGCGCCTG ATCGGTGACG ATGATATTGA AATCACGGCG GTAGGCTTCG CCCAGGAGGC GCTGGACCTG CTGCGCGATC ATGTCTATGA CTGCATGATC ATCGACCTGA AGCTGCCGGA CATGCTCGGC AATGAGTTGC TCAAGCGCAT GTCGATGGAA GACATCTGCG CCTTCCCGCC GGTCATCGTC TATACCGGCC GCAACATGAC CCGCGATGAA GAAGCCGAGC TGATGAAGTA TTCGCGTTCG ATCATCATCA AGGGCGCGCG CTCGCCGGAA AGGCTGCTCG ATGAGGTGAC GCTGTTTCTG CACAAGGTCG AATCGCAACT GTCCAACGAG CGACAAAAGA TGCTCAAGAC CGCGCGTAGC CGTGACAAGG TCTTCGAGGC GCGCAAGATC CTCGTGGTCG ACGACGATGT GCGCAATATC TTCGCGCTGA CCAGCGCTCT GGAACATAAA GGCGCGGTGG TGGAAATCGC CCGCAATGGT CTGGAGGCGA TTGCCAGGCT TAACGAGGTA GAAGACATCG ATCTGGTCCT GATGGATGTG ATGATGCCTG AGATGGACGG CTATGAAGCG ACCATCGAGA TTCGCAAGGA TCCGCGCTGG CGCAAACTGC CGATCATCGC CGTCACGGCC AAGGCCATGA AAGATGATCA GGAACGCTGC CTGCAAGCGG GTTCCAACGA TTACCTGGCC AAGCCCATTG ATCTGGACCG TCTGTTTTCG CTGATTCGCG TCTGGCTGCC GAAGATGGAG CGTATCTGA
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Protein sequence | MNRTSVVDEQ RFRKLLGRNV GLPLGVGVLS AVFFILLISY LLTAIQWVEH TDRVINNTNR SMKLSIDMET GMRGFLLTGD QHFLDPYEVA KPLLLAELQG LEKLVDDNPT QLDRFRRLST LQQEWNAFAQ EMITLRRTNG DYQTPVLAGR GKRITDQIRT EYDQAVEMEQ QLRLTRNAEV TRSTILSVTL YLIFVVVVSA ILAYIGRRDL LSLSNTYSEN LRLQEVNTER LQKVAWLRNG QSELAEQVLG QLTLNMLGRN ILQFLTQYLG ASVAAVYIRQ DHGGLTRAAS YGFSREQEQQ DQTIHSDEGI VGQAAQQDRI ITLDELPDNY FKVASGLGEG SPRSVVVVPT SNDDQVNGVI ELGFLRALTE RDIEFLELVA DNVGTSIEAA RYRQRLQEVL AETQQLNEEL QVQQEELRTA NEELEEQSRI LKESQAHLET QQAELEQTNE QLADQSQALA EQRDALDRNN EELNIAQAEL QARADELQRA SKYKSEFLAN MSHELRTPLN SSLILAKLLA ENPGENLTAE QVKFAESIYS AGNDLLNLIN DILDISKVEA GKLEMRPENS SVSRLVEGLR TLFQPLAAEK KLAFTVDIQA GAPTMLFTDR QRLEQILKNL LSNAIKFTEA GSVSMVVSRQ PGAGIAFIVR DSGIGIAEEH QQGIFEAFRQ ADGTTNRRYG GTGLGLSISR DLAALLGGSI SVTSAPGQGS IFSLVLPEHY VEQDDREPGS DLPIVSAPAA LQPYAPVLPV IAQPVPAPVP MDTPVPVFDD DRDKAPFQRR CILVIEDEVR FAQILYDLAH ELGYDCLVAH AADDGFNLAS RYTPDAILLD MRLPDHSGLT VLQRLKELAP TRHIPVHVIS VEDRQEAALH MGAIGYAVKP TTREELKDVF AKLEAKLTQK VKRILLVEDD ALQRDSIARL IGDDDIEITA VGFAQEALDL LRDHVYDCMI IDLKLPDMLG NELLKRMSME DICAFPPVIV YTGRNMTRDE EAELMKYSRS IIIKGARSPE RLLDEVTLFL HKVESQLSNE RQKMLKTARS RDKVFEARKI LVVDDDVRNI FALTSALEHK GAVVEIARNG LEAIARLNEV EDIDLVLMDV MMPEMDGYEA TIEIRKDPRW RKLPIIAVTA KAMKDDQERC LQAGSNDYLA KPIDLDRLFS LIRVWLPKME RI
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