Gene Psyr_2431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2431 
Symbol 
ID3367948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2812968 
End bp2814092 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content60% 
IMG OID637652779 
Productzinc-containing alcohol dehydrogenase superfamily protein 
Protein accessionYP_235508 
Protein GI66045667 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0046126 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGTCGT ACGGCGTTAC ACTTATCCCC ATTGAACAGG TGACAGTAAT GGTCAAGACA 
TACAGCTACG CAGCGCAATC GGCTCAGGAC ACACTCAAGC CCCATCAATT CGAACGTTGC
TCGCCCGGCG CTGACGATGT TCAGATCGAC ATCCTTTACT GCGGCGTGTG CCACTCCGAT
CTGCATACTG CGCGCAATGA GTGGCACAAC ACACTCTATC CTTCTGTTCC GGGTCACGAA
ATCGTCGGCC GGGTCACGGC GGTCGGCTCC GACGTCAAGC AATTCAAGGT AGGCGACCTG
GCTGGCGTCG GTTGCATGGT CGACAGTTGC CAGCAATGTG CATCGTGCGC CGAAGGTGAC
GAGCAATACT GCGAGAGCGG CTTCACCGGC ACCTACAATG GACCGGTATT TGGCGGCGAG
AACACATTCG GCGGCTACTC CGACAAGATC GTGGTCAAGG AAAAGTTCGT CTTGCGCATC
TCACATGATG CCAACCTGGC CGCCGTCGCG CCGCTGTTGT GCGCAGGTAT CACCACCTAT
TCCCCCTTGC GCCACTGGAA GGTCGGCCCC GGCAAGAAAG TCGGCATTGT CGGGCTTGGC
GGCCTCGGCC ACATGGGCGT CAAGATCGCC CACGCCATGG GCGCCCATGT GGTGCTGTTC
ACGACCTCCC CCGACAAGCG CGAAGATGGC TTGCGTCTGG GCGCCGACGA AGTGGTCGTA
TCCAGGGACG CGGGACAGAT GGCCGCGCAG GCCAACAGCC TGGACTTTAT CCTCAACACG
GTCGCAGCGC CGCATGACCT GGACGCCTTC CTGTCTCTTC TCAAGCGCGA CGGCACCATG
ACACTGGTTG GCGCGCCGGC AGAACCGCAT CCGTCACCCG CAGTGTTCAA CCTGATCTTC
AAGCGTCGCA GCCTGGCCGG CTCGTTGATC GGAGGCATTC AGGAAACCCA GGAAATGCTG
GACTTCTGCG CCGAGCACGG CATCGTTTCC GACATTGAAG TGATCGCCAT GCAGGACATC
AACGAGGCTT ACGAGCGGAT GCTCAAGGGC GACGTCAAGT ATCGCTTTGT CATCGACATG
GACAGCCTCA AGCAGGAAGC GGCTGCCGAC TCGAACGCTG CCTGA
 
Protein sequence
MLSYGVTLIP IEQVTVMVKT YSYAAQSAQD TLKPHQFERC SPGADDVQID ILYCGVCHSD 
LHTARNEWHN TLYPSVPGHE IVGRVTAVGS DVKQFKVGDL AGVGCMVDSC QQCASCAEGD
EQYCESGFTG TYNGPVFGGE NTFGGYSDKI VVKEKFVLRI SHDANLAAVA PLLCAGITTY
SPLRHWKVGP GKKVGIVGLG GLGHMGVKIA HAMGAHVVLF TTSPDKREDG LRLGADEVVV
SRDAGQMAAQ ANSLDFILNT VAAPHDLDAF LSLLKRDGTM TLVGAPAEPH PSPAVFNLIF
KRRSLAGSLI GGIQETQEML DFCAEHGIVS DIEVIAMQDI NEAYERMLKG DVKYRFVIDM
DSLKQEAAAD SNAA