Gene Psyr_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2429 
Symbol 
ID3367946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2811116 
End bp2812177 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content61% 
IMG OID637652777 
Producthypothetical protein 
Protein accessionYP_235506 
Protein GI66045665 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.143055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.111053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGA CCGCCCTGGT TGTTGGCGCA AGTGGCATTG TCGGCAGCGC AATCACGCAG 
TTGTTACTGG AAAACGATTG GCAGGTTGCC GCCCTCTCCC GTAGCCCGTC AGCGCGGCCC
GGTGTAATCC CGGTAGCTGC AGACCTGCAG GACCCGGATT CCGTGCGTGC GGCTCTGGCT
GATGTGAAGC CCACCCACGT TTTCATCACC ACATGGTCGC GTCAGGCCAC TGAAGCAGAA
AACATCCGCG TCAATGCTGC GATGGTGCGC AACGTGCTGG ACGCTGTGCG GCCCGCTGGC
AGTGTCAAGC ATGTTGCGCT GGTGACCGGC CTCAAGCATT ACCTCGGCCC GTTCGAAGCA
TATGGCAAAG GCACCCTGCC GCAAACGCCG TTCAGGGAAT CGCAGGCGCG CCTGGATATC
GAGAACTTCT ACTACGCCCA GGAAGACGAA GTCTTCGCTG CCGCCGAAAA GGATGGCTTT
ACCTGGAGCG TCCATCGCCC GCACACCGTG ACCGGTGTCG CCGTCGGCAA CGCGATGAAC
ATGGCGACGA CCCTGGCCGT TTACGCCTCG ATCTGTAAAG CCACCGGCCG ACCTTTCGTG
TTCCCGGGTT CACGCGTGCA GTGGGACAGC CTGACCGACA TGACCGATGC GCGTCAGCTG
GCCCGCCAGC AACTGTGGGC TGCGACCACA CCTGCAGCGG CCAATCAGGC GTTCAACATC
ACCAACGGCG ATGTGTTCCG CTGGAGCTGG ATGTGGGGAC AGATCGCCGA ATACTTCGGC
TTGCAACCAG CCGATTTCCC GAGCGAGCCT GCCCCGCTGG AAACGCAGAT GGCCAACGAT
CAAGCAATCT GGGATGACAT TGTCCGCGAG CATCAGCTCA AGGAAAGTGA CATCAACCGC
CTGATTTCGC CATGGCACAG CGATGCCGAC CTTGGCCGCC CGATCGAGGT GGTCACCGAC
ATGTCGAAAA GCCGCAAACT GGGTTTCACG GCATTTCAGG CCAGTGACGA CGCGTTCTTC
GACGTGTTTG AAAAGCTGCG CCGTGACCGC CTGATCCCCT GA
 
Protein sequence
MTQTALVVGA SGIVGSAITQ LLLENDWQVA ALSRSPSARP GVIPVAADLQ DPDSVRAALA 
DVKPTHVFIT TWSRQATEAE NIRVNAAMVR NVLDAVRPAG SVKHVALVTG LKHYLGPFEA
YGKGTLPQTP FRESQARLDI ENFYYAQEDE VFAAAEKDGF TWSVHRPHTV TGVAVGNAMN
MATTLAVYAS ICKATGRPFV FPGSRVQWDS LTDMTDARQL ARQQLWAATT PAAANQAFNI
TNGDVFRWSW MWGQIAEYFG LQPADFPSEP APLETQMAND QAIWDDIVRE HQLKESDINR
LISPWHSDAD LGRPIEVVTD MSKSRKLGFT AFQASDDAFF DVFEKLRRDR LIP