Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2421 |
Symbol | |
ID | 3367936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2803152 |
End bp | 2804306 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652767 |
Product | major facilitator transporter |
Protein accession | YP_235498 |
Protein GI | 66045657 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.75616 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTTGC CCATCCTTCT GCTGTCAGCC GCCGGGTTTA CCGTGCTGAC CACAGAATTC GTCATCGTCG GTCTTTTGCC AGCGGTTGCC CGCGACCTGA ATGTCACGGT CTCCCAGGCA GGTCTGCTGG TGACGCTGTT TGCGTTTACC GTCGCCGCCT TTGGTCCTTT TCTGACCGCC TATTTTTCGC GCTTCGAGCG CAAGCGCTTG TTTGTCAGCA TCCTGGTGCT GTTCGGCTTT GCAAATGTCC TGGCGGCGCT GGCGCCCAAT ATCGCCGTGA TGGGGATCGC CCGGCTGATT CCTGCGTTGG GGTTACCGGT GTTCTGGGCG CTGGCCAGCG AGACCGCCGT GGACATTGTC GGTCCGCAGT TCGCAGGCCG GGCAATTGCC AGGATCGGTT TCGGCATCGT TTGCGCCACG GTATTCGGCA TTCCCATCGG CACCCTGATC TCCGATGCCT TCGGCTGGCG CACGGCCTTT CTGGTTCTGG CCGCTCTGGC GTTCGCCAAG GCACTGTTGC TGACGGTCTA TCTGCCGAAG ACGGCTGCCA GGCAGAACCC GGTATCGATC CTTAAGCAGT TCGGCATCTT GCGCAGCCGG ATGATGCAGG GGCACGTGCT GCTCTCGGTG CTGGTGTTCA GCGGCATGTT CACGGCCTAT ACCTATCTGG CGGACATGCT CGAGCGTCTT GCCGGTTTCG ACGGCGCTCT GGTGGGCTGG TGCCTGATGG GCTTTGGCGC TGTCGGCTTG CTGGGCAACT CGCTGGGCGG GCGCATGGTC GACCGCCATC CGTTGATTGC CAGCCTGGTG TTCTGCGCAT TCATGGTGGT TGGCATGGTC GCGGTGGTGC CGAGCATCCA TTCGGTGGTG GCCTTGTCAC TCGCGCTGGC GGTCTGGGGT ATCACCCAGG CGGCCTTGTT TCTGGTCAGT CATGTGCGGT TGATCAAGGC CGCGCCGCAA GCGCCTGCGT TCGCGGCGTC ACTGAACATC GCTGGTGCCA ACCTCGGCAT TGGCATCGGC GCGGTGATCG GCGGCAGGGT CATTGATCAC CTGGGGCTGG GCAACGTCGG TTTTGCCGCT GCGGGCATCA TTGTGCTGGC GATTGTGCTG GCGCTGCTGT TGATCAAGCG TGATCCGGGG CCGCTCCCGG CTTAG
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Protein sequence | MLLPILLLSA AGFTVLTTEF VIVGLLPAVA RDLNVTVSQA GLLVTLFAFT VAAFGPFLTA YFSRFERKRL FVSILVLFGF ANVLAALAPN IAVMGIARLI PALGLPVFWA LASETAVDIV GPQFAGRAIA RIGFGIVCAT VFGIPIGTLI SDAFGWRTAF LVLAALAFAK ALLLTVYLPK TAARQNPVSI LKQFGILRSR MMQGHVLLSV LVFSGMFTAY TYLADMLERL AGFDGALVGW CLMGFGAVGL LGNSLGGRMV DRHPLIASLV FCAFMVVGMV AVVPSIHSVV ALSLALAVWG ITQAALFLVS HVRLIKAAPQ APAFAASLNI AGANLGIGIG AVIGGRVIDH LGLGNVGFAA AGIIVLAIVL ALLLIKRDPG PLPA
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