| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2412 |
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| Symbol | |
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| ID | 3367927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2793386 |
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| End bp | 2796157 |
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| Gene Length | 2772 bp |
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| Protein Length | 923 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637652758 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_235489 |
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| Protein GI | 66045648 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.394725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAC AGTCTGCCGC ACTGCATCAT CATACGCCCC GCCTGACTGT CATTGATCCT
CGCGGGCTGG AGATTCGCGC GATTGATTTC TGGCGCAACC CGTTAATCGA CACGCCGGAA
CGACTGGTAA ACCGCGCCGC TCATGACGCT GCCGGGCATC CGGTCAGCTG CTGGGATGCA
AGGCTCTGGG AAAGCCAGGC TGCGGTCAAT ATTGCTACTG TGTTCTCCCT GAGTGGTCAG
GCGCTTTTCA GCGACAGTGT CGATGCCGGT TGGCGGCTGA TGCTGGCCGG TGAAAGCGGC
GAGGTCGTGG TGAGCCGGGA TGGCCGTGGA ACTGAGCGAA GTGTGCAGTA TGACGCCCAG
CTCAGACCCG TTGCCATTAT TGAAAACGGA CGCTGCGTCG AACGGCGGCA ATACGGCGGC
GCGGATACTC AGGGCCATAA CCAGTGCAAC CAATGCATAC GCCATGATGA CCCGGCTGGT
TCACGAATGG ATGCCGAGTT CGCCCTGACG GGTGGCGTGC TTGAACAGAC GCGGCATTTT
CTCTTCAATC CCGAAAATGT CGACTGGCCA GAACCGCTGA CAGAACGTGA CGCCTTGCTC
GAATCTGGTC CAGGCGCAAC TACGCGCTGG GCACGCAGTC CGCCTGGCGA TGTCATCTCG
CAGACGGACG CCCAGCGTAA CGTCCAGACC TTTGCCCATA GTGCGGCAGG TCATATCGAG
GCCATTTCAC TCAGCCTCCC CGGGCAGACA GAGCGAATTC TGATTCACAG GATCGATTAC
GACGCTCAAG GCCACGTAAC CTCGGAAACG GCTGGCAACG GTGTTATGAC CAAGGCGTTG
CATGACGCCG CAAATGGCCG TCTGATTGAA CTCAAAGGCA CACGAGCAGA TGGCCAACTG
CTGCAACATC TGCTGTATGA CTACGACCCG GTGGGCAATG TCCTGCGTAT TGAAGATCGC
GCTCAGCCGA CGCGGTACTA TCGCAATCAG CGCCTTGAAC CGGTGTCGAC TTATCAATAC
GACACGCTGT ATCAGTTGAT CCAGGCTACG GGCACGGAGT CCGCGAAACG CAATAAAGGC
CCGGTTTTTC CATCATTCCA GGTTCCCCCC GACCCGACGC AGCTAGCCAA TTACAGGCAA
ACCTATCGTT ATGATGCGAG CGGCAATCTG CTGCAACTGA CTCACACTGG CACCCAGTCC
CACTCGCGCA CTCTGGTCAC TTCGCAAACC AGCAATCGCA GCCTGCCGGT CATCAACGAT
CAACCGCCGG ATGAAGCAGC CATCGCTGCC GCGTTCGACG CCAATGGCAA TCTGAGTGAG
CTGCAAGCCG GGCAAGCGAT GAGCTGGGAC TGGCGTAATC AGTTGCAGCA AGTGCGGCCT
GTGGTTCGGG AAGCGGGTGA CGACGACAAA GAGCGCTATG TCTACGACGC CAGTGGGCAA
CGCCTGCGCA AAATCCATAC GACCAAGGCG AAAGCCGTTG TCCACAATGC CGAAGTGCGC
TACTTGCCAG GCCTGGAGGT GCACAGCAAC AGCGCCACAG CCGAGACCTT GCACGTTATC
GTCACCCAGG CCGGGCGCAA CGAGGTACTG GTGTTGCACT GGCAGGCGGG TCAACCCGAA
GGACTTGAAA ACGATCAGGT TCGCTACAGC TTCGCCGATC ATCTGGGGTC CGGCACCCTG
GAGCTGGATA AAAACGCGCA CATCATCAGC CAGGAAAGTT ACTACCCGTT TGGTGGTACC
TCGTGGTGGG CAGGGCGCAG TACGATTGAA GCCAGCTATA AAACCATTCG TTATTCTGGC
AAGGAACGCG ATGCAACAGG GCTGTACTAC TACGGCCTGC GCTATTACGC GCCATGGTTG
CAGCGATGGA TCAATACTGA TCCGGCGGGC ACAGTGGATG GGATGAACCT GTATCGTTTT
GTCGGGAATT CGCCTTTGCG GTTTGCTGAT CAACAAGGGG CTGCTCCTTA CGACGTGCCC
ATTACCGTTG TCGTTGCAAA GGACCTTTCC GAGTTCTCGC CTGAGCAGCT ATCCAAAATG
TATGACGCCA AGGATGCTGC CGTTTCGTTA TTGGGGTTCA CGCGTTCCGA GCTGCTAAAA
GCATCACCGA GGCGAGACGT AAACAAGGCT TTCGACGCAA CCTTTGGGGC GCTGGCCCCC
AGCGCTCGCG CCGCTACGAG TATCGACGTG GAGGATTCCT TACGGCAGAT GCATGAGCTC
ATTGAGGGCA TCGGCAGTCC AGAATCCGAT CTGACGCTGT TTCTTTTTGA TGGACCCGAG
CACATTCTCG CGTCGACTCA TTTTCAAGGC GAGTTTGATG AATCGGTCGA ACGGATTGGG
GTGTCGGCCT CCCTGCTTGC CAACTACGAT GTGCTGGAAG TTGCACGTTC TCTTATTCAC
GAGGCCTCCC ATGTCCGCCT GAATACAATG GATGCGTTTT ATTATCTGAC GGATCCTGAC
AAGCTCCTCG TCGATGGAGC GGATACCGCA CAGGTCAAGG CGTGGTCCGG CGAGTTGCGA
AAGTCATTAA GAAAAATCTC GAAGCATGGC CCCAATGAAA AACGATTCGA TCCAGCCAAC
TATATAGTCG CCATGCAGGC GTTGACCGAG AATGCGCACA CCCCGGCACA GCGAAAACAA
GAGTTCCTGA GCACCACAAC GACCAGAACT TCATTGTTGC TGATGAATGC CGACACGCTT
TCGTCGCTGG TCATGGCGAC CGGACAGTCT GCCCGGTATG CGCAAACACG GATAAATCAG
TCTGGACATT AG
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| Protein sequence | MNAQSAALHH HTPRLTVIDP RGLEIRAIDF WRNPLIDTPE RLVNRAAHDA AGHPVSCWDA
RLWESQAAVN IATVFSLSGQ ALFSDSVDAG WRLMLAGESG EVVVSRDGRG TERSVQYDAQ
LRPVAIIENG RCVERRQYGG ADTQGHNQCN QCIRHDDPAG SRMDAEFALT GGVLEQTRHF
LFNPENVDWP EPLTERDALL ESGPGATTRW ARSPPGDVIS QTDAQRNVQT FAHSAAGHIE
AISLSLPGQT ERILIHRIDY DAQGHVTSET AGNGVMTKAL HDAANGRLIE LKGTRADGQL
LQHLLYDYDP VGNVLRIEDR AQPTRYYRNQ RLEPVSTYQY DTLYQLIQAT GTESAKRNKG
PVFPSFQVPP DPTQLANYRQ TYRYDASGNL LQLTHTGTQS HSRTLVTSQT SNRSLPVIND
QPPDEAAIAA AFDANGNLSE LQAGQAMSWD WRNQLQQVRP VVREAGDDDK ERYVYDASGQ
RLRKIHTTKA KAVVHNAEVR YLPGLEVHSN SATAETLHVI VTQAGRNEVL VLHWQAGQPE
GLENDQVRYS FADHLGSGTL ELDKNAHIIS QESYYPFGGT SWWAGRSTIE ASYKTIRYSG
KERDATGLYY YGLRYYAPWL QRWINTDPAG TVDGMNLYRF VGNSPLRFAD QQGAAPYDVP
ITVVVAKDLS EFSPEQLSKM YDAKDAAVSL LGFTRSELLK ASPRRDVNKA FDATFGALAP
SARAATSIDV EDSLRQMHEL IEGIGSPESD LTLFLFDGPE HILASTHFQG EFDESVERIG
VSASLLANYD VLEVARSLIH EASHVRLNTM DAFYYLTDPD KLLVDGADTA QVKAWSGELR
KSLRKISKHG PNEKRFDPAN YIVAMQALTE NAHTPAQRKQ EFLSTTTTRT SLLLMNADTL
SSLVMATGQS ARYAQTRINQ SGH
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